STRINGSTRING
EDM28686.1 EDM28686.1 EDM28685.1 EDM28685.1 EDM26925.1 EDM26925.1 EDM26924.1 EDM26924.1 EDM26066.1 EDM26066.1 EDM26058.1 EDM26058.1 uxaC uxaC rnc rnc EDM28740.1 EDM28740.1 EDM28781.1 EDM28781.1 EDM28820.1 EDM28820.1 EDM28068.1 EDM28068.1 EDM27085.1 EDM27085.1 EDM29445.1 EDM29445.1 EDM29505.1 EDM29505.1 xylA xylA uxaC-2 uxaC-2 EDM26028.1 EDM26028.1 uxaC-3 uxaC-3 EDM27265.1 EDM27265.1 EDM29148.1 EDM29148.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EDM28686.1Hypothetical protein; COG5434 Endopolygalacturonase. (200 aa)
EDM28685.1Band 7 protein. (252 aa)
EDM26925.1L-rhamnose isomerase; COG1070 Sugar (pentulose and hexulose) kinases. (480 aa)
EDM26924.1COG4952 Predicted sugar isomerase. (432 aa)
EDM26066.1WD40-like Beta Propeller; COG0823 Periplasmic component of the Tol biopolymer transport system. (407 aa)
EDM26058.1COG1004 Predicted UDP-glucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (457 aa)
uxaCCOG1904 Glucuronate isomerase. (466 aa)
rncRibonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. (232 aa)
EDM28740.1Hypothetical protein. (265 aa)
EDM28781.1Hypothetical protein. (874 aa)
EDM28820.1Hypothetical protein. (1121 aa)
EDM28068.1Hypothetical protein; COG0823 Periplasmic component of the Tol biopolymer transport system. (973 aa)
EDM27085.1COG0036 Pentose-5-phosphate-3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (220 aa)
EDM29445.1Hypothetical protein; COG0726 Predicted xylanase/chitin deacetylase. (234 aa)
EDM29505.1Xylulose kinase; COG1070 Sugar (pentulose and hexulose) kinases. (502 aa)
xylACOG2115 Xylose isomerase; Belongs to the xylose isomerase family. (436 aa)
uxaC-2COG1904 Glucuronate isomerase. (469 aa)
EDM26028.1COG5434 Endopolygalacturonase; Belongs to the glycosyl hydrolase 28 family. (484 aa)
uxaC-3COG1904 Glucuronate isomerase. (467 aa)
EDM27265.1Hypothetical protein. (563 aa)
EDM29148.1Ribulokinase; COG1069 Ribulose kinase. (555 aa)
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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