Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDM24787.1 | EDM29661.1 | LNTAR_03829 | LNTAR_17963 | Probable CDP-diacylglycerol--serine O-phosphatidyltransferase; COG1183 Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | COG0560 Phosphoserine phosphatase. | 0.639 |
| EDM25110.1 | EDM25111.1 | LNTAR_02839 | LNTAR_02844 | COG0498 Threonine synthase. | COG0460 Homoserine dehydrogenase. | 0.995 |
| EDM25110.1 | EDM25818.1 | LNTAR_02839 | LNTAR_01387 | COG0498 Threonine synthase. | COG0527 Aspartokinases. | 0.774 |
| EDM25110.1 | EDM26067.1 | LNTAR_02839 | LNTAR_04436 | COG0498 Threonine synthase. | Transcriptional regulator, XRE family protein; COG0560 Phosphoserine phosphatase. | 0.485 |
| EDM25110.1 | EDM26891.1 | LNTAR_02839 | LNTAR_06584 | COG0498 Threonine synthase. | COG0515 Serine/threonine protein kinase. | 0.579 |
| EDM25110.1 | EDM29422.1 | LNTAR_02839 | LNTAR_16768 | COG0498 Threonine synthase. | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | 0.656 |
| EDM25110.1 | EDM29661.1 | LNTAR_02839 | LNTAR_17963 | COG0498 Threonine synthase. | COG0560 Phosphoserine phosphatase. | 0.499 |
| EDM25110.1 | asd | LNTAR_02839 | LNTAR_10426 | COG0498 Threonine synthase. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.523 |
| EDM25110.1 | ilvA | LNTAR_02839 | LNTAR_17978 | COG0498 Threonine synthase. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.752 |
| EDM25111.1 | EDM25110.1 | LNTAR_02844 | LNTAR_02839 | COG0460 Homoserine dehydrogenase. | COG0498 Threonine synthase. | 0.995 |
| EDM25111.1 | EDM25818.1 | LNTAR_02844 | LNTAR_01387 | COG0460 Homoserine dehydrogenase. | COG0527 Aspartokinases. | 0.809 |
| EDM25111.1 | EDM26067.1 | LNTAR_02844 | LNTAR_04436 | COG0460 Homoserine dehydrogenase. | Transcriptional regulator, XRE family protein; COG0560 Phosphoserine phosphatase. | 0.634 |
| EDM25111.1 | EDM26891.1 | LNTAR_02844 | LNTAR_06584 | COG0460 Homoserine dehydrogenase. | COG0515 Serine/threonine protein kinase. | 0.549 |
| EDM25111.1 | EDM29661.1 | LNTAR_02844 | LNTAR_17963 | COG0460 Homoserine dehydrogenase. | COG0560 Phosphoserine phosphatase. | 0.674 |
| EDM25111.1 | asd | LNTAR_02844 | LNTAR_10426 | COG0460 Homoserine dehydrogenase. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.918 |
| EDM25111.1 | glyA-2 | LNTAR_02844 | LNTAR_05186 | COG0460 Homoserine dehydrogenase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.604 |
| EDM25111.1 | ilvA | LNTAR_02844 | LNTAR_17978 | COG0460 Homoserine dehydrogenase. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.721 |
| EDM25111.1 | trpA | LNTAR_02844 | LNTAR_12491 | COG0460 Homoserine dehydrogenase. | Tryptophan synthase alpha subunit-like protein; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.582 |
| EDM25111.1 | trpB | LNTAR_02844 | LNTAR_12496 | COG0460 Homoserine dehydrogenase. | Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.521 |
| EDM25818.1 | EDM25110.1 | LNTAR_01387 | LNTAR_02839 | COG0527 Aspartokinases. | COG0498 Threonine synthase. | 0.774 |
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