Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDM24698.1 | EDM27753.1 | LNTAR_06839 | LNTAR_00090 | Hypothetical protein. | Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.447 |
| EDM24698.1 | EDM29254.1 | LNTAR_06839 | LNTAR_22729 | Hypothetical protein. | Possible glycosyl hydrolase; COG3664 Beta-xylosidase. | 0.612 |
| EDM24698.1 | glgB | LNTAR_06839 | LNTAR_24651 | Hypothetical protein. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.514 |
| EDM24698.1 | glgC | LNTAR_06839 | LNTAR_20368 | Hypothetical protein. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.415 |
| EDM24761.1 | EDM28593.1 | LNTAR_03929 | LNTAR_08489 | COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase. | Sugar kinase; COG1940 Transcriptional regulator/sugar kinase. | 0.777 |
| EDM24967.1 | EDM27553.1 | LNTAR_07876 | LNTAR_20143 | Putative transcriptional regulator, rpiR family protein; COG1737 Transcriptional regulators. | COG1940 Transcriptional regulator/sugar kinase. | 0.458 |
| EDM24967.1 | EDM28593.1 | LNTAR_07876 | LNTAR_08489 | Putative transcriptional regulator, rpiR family protein; COG1737 Transcriptional regulators. | Sugar kinase; COG1940 Transcriptional regulator/sugar kinase. | 0.788 |
| EDM24967.1 | pgi | LNTAR_07876 | LNTAR_09079 | Putative transcriptional regulator, rpiR family protein; COG1737 Transcriptional regulators. | COG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.585 |
| EDM25033.1 | EDM28712.1 | LNTAR_01767 | LNTAR_09084 | Cellulose-binding, family II, bacterial type; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Cellulase precursor. | 0.771 |
| EDM25033.1 | EDM29254.1 | LNTAR_01767 | LNTAR_22729 | Cellulose-binding, family II, bacterial type; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Possible glycosyl hydrolase; COG3664 Beta-xylosidase. | 0.611 |
| EDM25052.1 | EDM27753.1 | LNTAR_01862 | LNTAR_00090 | alpha-L-rhamnosidase (putative). | Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.626 |
| EDM25052.1 | EDM28968.1 | LNTAR_01862 | LNTAR_14167 | alpha-L-rhamnosidase (putative). | COG0033 Phosphoglucomutase. | 0.518 |
| EDM25052.1 | EDM29271.1 | LNTAR_01862 | LNTAR_22814 | alpha-L-rhamnosidase (putative). | Hypothetical protein. | 0.410 |
| EDM25052.1 | EDM29455.1 | LNTAR_01862 | LNTAR_16933 | alpha-L-rhamnosidase (putative). | Hypothetical protein; COG3534 Alpha-L-arabinofuranosidase. | 0.476 |
| EDM25052.1 | glgB | LNTAR_01862 | LNTAR_24651 | alpha-L-rhamnosidase (putative). | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.531 |
| EDM25061.1 | EDM28593.1 | LNTAR_09991 | LNTAR_08489 | Hypothetical ROK family protein; COG1940 Transcriptional regulator/sugar kinase. | Sugar kinase; COG1940 Transcriptional regulator/sugar kinase. | 0.506 |
| EDM25061.1 | EDM29254.1 | LNTAR_09991 | LNTAR_22729 | Hypothetical ROK family protein; COG1940 Transcriptional regulator/sugar kinase. | Possible glycosyl hydrolase; COG3664 Beta-xylosidase. | 0.511 |
| EDM25393.1 | EDM26162.1 | LNTAR_09676 | LNTAR_16483 | Hypothetical protein. | Hypothetical protein. | 0.423 |
| EDM26038.1 | EDM26378.1 | LNTAR_19612 | LNTAR_19942 | Hypothetical protein; COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases; Belongs to the glycosyl hydrolase 31 family. | Phosphorylase kinase alpha subunit. | 0.411 |
| EDM26038.1 | EDM28593.1 | LNTAR_19612 | LNTAR_08489 | Hypothetical protein; COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases; Belongs to the glycosyl hydrolase 31 family. | Sugar kinase; COG1940 Transcriptional regulator/sugar kinase. | 0.607 |
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