STRINGSTRING
EDM28526.1 EDM28526.1 EDM29037.1 EDM29037.1 EDM26160.1 EDM26160.1 EDM26161.1 EDM26161.1 EDM27260.1 EDM27260.1 EDM26391.1 EDM26391.1 EDM29213.1 EDM29213.1 EDM27984.1 EDM27984.1 EDM25106.1 EDM25106.1 EDM26893.1 EDM26893.1 EDM25884.1 EDM25884.1 EDM25900.1 EDM25900.1 EDM27297.1 EDM27297.1 EDM25901.1 EDM25901.1 EDM27274.1 EDM27274.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EDM28526.1Glycoside hydrolase, clan GH-D; COG3345 Alpha-galactosidase. (466 aa)
EDM29037.1Hypothetical protein; COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins. (389 aa)
EDM26160.1Hypothetical protein; COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins. (252 aa)
EDM26161.1Glycosyl hydrolase, family 88; COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins. (115 aa)
EDM27260.1Alpha-1,6-galactosidase, putative; COG3345 Alpha-galactosidase. (669 aa)
EDM26391.1COG4409 Neuraminidase (sialidase). (388 aa)
EDM29213.1Putative alpha-galactosidase SCF85.02; COG3345 Alpha-galactosidase. (753 aa)
EDM27984.1Hypothetical protein. (352 aa)
EDM25106.1Hypothetical protein. (569 aa)
EDM26893.1Glycosyl hydrolase, family 88; COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins. (414 aa)
EDM25884.1Hypothetical protein; COG0069 Glutamate synthase domain 2. (402 aa)
EDM25900.1Hypothetical protein; COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins. (379 aa)
EDM27297.1COG3345 Alpha-galactosidase. (712 aa)
EDM25901.1Hypothetical protein; COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins. (379 aa)
EDM27274.1Alpha-1,6-galactosidase, putative; COG3345 Alpha-galactosidase. (669 aa)
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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