STRINGSTRING
EDM27759.1 EDM27759.1 yidC yidC EDM27828.1 EDM27828.1 EDM27900.1 EDM27900.1 secY secY EDM25032.1 EDM25032.1 EDM26527.1 EDM26527.1 EDM26575.1 EDM26575.1 EDM26646.1 EDM26646.1 EDM25122.1 EDM25122.1 ftsY ftsY EDM24929.1 EDM24929.1 secA secA EDM26069.1 EDM26069.1 EDM26106.1 EDM26106.1 EDM27451.1 EDM27451.1 EDM27537.1 EDM27537.1 EDM26982.1 EDM26982.1 EDM27036.1 EDM27036.1 EDM25914.1 EDM25914.1 EDM24992.1 EDM24992.1 EDM28585.1 EDM28585.1 EDM28697.1 EDM28697.1 EDM28733.1 EDM28733.1 EDM28734.1 EDM28734.1 EDM28736.1 EDM28736.1 EDM28738.1 EDM28738.1 EDM28739.1 EDM28739.1 EDM28746.1 EDM28746.1 EDM28755.1 EDM28755.1 EDM28756.1 EDM28756.1 EDM28757.1 EDM28757.1 EDM25405.1 EDM25405.1 EDM25417.1 EDM25417.1 EDM25067.1 EDM25067.1 EDM25076.1 EDM25076.1 EDM28313.1 EDM28313.1 EDM28394.1 EDM28394.1 EDM28435.1 EDM28435.1 EDM28442.1 EDM28442.1 EDM28470.1 EDM28470.1 EDM28015.1 EDM28015.1 EDM28051.1 EDM28051.1 EDM28096.1 EDM28096.1 EDM28115.1 EDM28115.1 EDM28116.1 EDM28116.1 EDM28141.1 EDM28141.1 EDM28166.1 EDM28166.1 EDM28836.1 EDM28836.1 EDM28837.1 EDM28837.1 EDM28838.1 EDM28838.1 EDM28839.1 EDM28839.1 EDM28960.1 EDM28960.1 EDM28970.1 EDM28970.1 EDM29010.1 EDM29010.1 EDM29090.1 EDM29090.1 EDM27092.1 EDM27092.1 EDM24660.1 EDM24660.1 EDM27103.1 EDM27103.1 EDM27238.1 EDM27238.1 EDM27239.1 EDM27239.1 EDM27240.1 EDM27240.1 EDM26131.1 EDM26131.1 EDM29666.1 EDM29666.1 EDM29748.1 EDM29748.1 EDM24682.1 EDM24682.1 EDM26651.1 EDM26651.1 EDM26755.1 EDM26755.1 ffh ffh EDM26018.1 EDM26018.1 EDM26021.1 EDM26021.1 EDM26022.1 EDM26022.1 EDM26023.1 EDM26023.1 EDM26029.1 EDM26029.1 secE secE dnaA dnaA EDM26376.1 EDM26376.1 EDM27704.1 EDM27704.1 EDM27301.1 EDM27301.1 EDM24864.1 EDM24864.1 EDM29233.1 EDM29233.1 EDM25520.1 EDM25520.1 EDM26268.1 EDM26268.1 EDM26293.1 EDM26293.1 EDM25150.1 EDM25150.1 EDM25636.1 EDM25636.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EDM27759.1Hypothetical protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (517 aa)
yidCHypothetical protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. (614 aa)
EDM27828.1phospholipase/Carboxylesterase; COG4099 Predicted peptidase. (230 aa)
EDM27900.1COG3012 Uncharacterized protein conserved in bacteria. (116 aa)
secYProtein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (453 aa)
EDM25032.1Hypothetical protein; COG3264 Small-conductance mechanosensitive channel. (304 aa)
EDM26527.1Antibiotic biosynthesis monooxygenase. (97 aa)
EDM26575.1Transcriptional regulator, IclR family protein; COG1414 Transcriptional regulator. (259 aa)
EDM26646.1Regulatory protein, AsnC/Lrp; COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component. (266 aa)
EDM25122.1Hypothetical protein; COG0550 Topoisomerase IA. (395 aa)
ftsYFused Signal Recognition Particle (SRP) receptor: membrane binding protein/conserved protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). (311 aa)
EDM24929.1MdsD protein, putative; Degrades oligopeptides; Belongs to the peptidase S41B family. (1121 aa)
secATranslocase; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. (1012 aa)
EDM26069.1Hypothetical protein. (392 aa)
EDM26106.1Ferric uptake regulator family protein; COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family. (151 aa)
EDM27451.1COG3209 Rhs family protein. (2320 aa)
EDM27537.1COG3238 Uncharacterized protein conserved in bacteria. (149 aa)
EDM26982.1Hypothetical protein. (186 aa)
EDM27036.1Hypothetical protein. (449 aa)
EDM25914.1Hypothetical protein; COG2319 FOG: WD40 repeat. (309 aa)
EDM24992.1Hypothetical protein. (320 aa)
EDM28585.1Hypothetical protein; COG1520 FOG: WD40-like repeat. (317 aa)
EDM28697.13-deoxy-7-phosphoheptulonate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). (347 aa)
EDM28733.1Hypothetical protein; COG3525 N-acetyl-beta-hexosaminidase. (1551 aa)
EDM28734.1Hypothetical protein. (1338 aa)
EDM28736.1COG3055 Uncharacterized protein conserved in bacteria. (483 aa)
EDM28738.1Hypothetical protein. (837 aa)
EDM28739.1Hypothetical protein. (855 aa)
EDM28746.1Putative alpha-1,2-mannosidase. (1569 aa)
EDM28755.1Hypothetical protein. (868 aa)
EDM28756.1Hypothetical protein. (1499 aa)
EDM28757.1Short chain dehydrogenase; COG3291 FOG: PKD repeat. (1422 aa)
EDM25405.1COG3509 Poly(3-hydroxybutyrate) depolymerase. (286 aa)
EDM25417.1Hypothetical protein; COG4099 Predicted peptidase. (294 aa)
EDM25067.1Probable serine/threonine-protein kinase; COG0515 Serine/threonine protein kinase. (631 aa)
EDM25076.1Putative acyl-CoA synthetase, long-chain-fatty acid:CoA ligase; COG1022 Long-chain acyl-CoA synthetases (AMP-forming). (579 aa)
EDM28313.1Hypothetical protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (115 aa)
EDM28394.1Stage III sporulation protein E; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; Belongs to the FtsK/SpoIIIE/SftA family. (639 aa)
EDM28435.1Hypothetical protein. (185 aa)
EDM28442.1Hypothetical protein; COG2319 FOG: WD40 repeat. (303 aa)
EDM28470.1Hypothetical protein; COG4099 Predicted peptidase. (259 aa)
EDM28015.1phospholipase/Carboxylesterase; COG4099 Predicted peptidase. (254 aa)
EDM28051.1ABC transporter, periplasmic binding protein, putative; COG3899 Predicted ATPase. (1031 aa)
EDM28096.1COG3209 Rhs family protein. (2139 aa)
EDM28115.1Hypothetical protein; COG0668 Small-conductance mechanosensitive channel. (185 aa)
EDM28116.1Hypothetical protein; COG0668 Small-conductance mechanosensitive channel. (100 aa)
EDM28141.1Hypothetical protein. (227 aa)
EDM28166.1Na-K-Cl cotransporter, putative; COG0531 Amino acid transporters. (750 aa)
EDM28836.1DppD; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily. (337 aa)
EDM28837.1COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components. (462 aa)
EDM28838.1COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components. (311 aa)
EDM28839.1COG4166 ABC-type oligopeptide transport system, periplasmic component. (532 aa)
EDM28960.1COG0515 Serine/threonine protein kinase. (558 aa)
EDM28970.1COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins. (795 aa)
EDM29010.1Hypothetical protein; COG0668 Small-conductance mechanosensitive channel. (301 aa)
EDM29090.1Hypothetical protein; COG0668 Small-conductance mechanosensitive channel. (641 aa)
EDM27092.1COG1862 Preprotein translocase subunit YajC. (106 aa)
EDM24660.1COG0515 Serine/threonine protein kinase. (115 aa)
EDM27103.1Chromosome segregation protein; COG0419 ATPase involved in DNA repair. (583 aa)
EDM27238.1COG4166 ABC-type oligopeptide transport system, periplasmic component. (690 aa)
EDM27239.1Oligopeptide transport ATP-binding protein OppD; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily. (330 aa)
EDM27240.1COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily. (323 aa)
EDM26131.1Hypothetical protein. (316 aa)
EDM29666.1Hypothetical protein; COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes. (367 aa)
EDM29748.1Hypothetical protein. (417 aa)
EDM24682.1Hypothetical protein. (365 aa)
EDM26651.1Hypothetical protein. (403 aa)
EDM26755.1Long-chain fatty-acid-CoA ligase; COG1022 Long-chain acyl-CoA synthetases (AMP-forming). (562 aa)
ffhSignal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. (469 aa)
EDM26018.1phospholipase/Carboxylesterase; COG4099 Predicted peptidase. (232 aa)
EDM26021.1Hypothetical protein; Belongs to the glycosyl hydrolase 26 family. (121 aa)
EDM26022.1Mannan endo-1,4-beta-mannosidase precursor; Belongs to the glycosyl hydrolase 26 family. (184 aa)
EDM26023.1Hypothetical protein; COG2319 FOG: WD40 repeat. (309 aa)
EDM26029.1Hypothetical protein; COG4099 Predicted peptidase. (263 aa)
secEHypothetical protein; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (62 aa)
dnaAChromosomal replication initiation protein. (120 aa)
EDM26376.1Probable aldolase; COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; Belongs to the class-II DAHP synthase family. (445 aa)
EDM27704.1Hypothetical protein; COG4099 Predicted peptidase. (255 aa)
EDM27301.1COG0641 Arylsulfatase regulator (Fe-S oxidoreductase). (410 aa)
EDM24864.1COG0668 Small-conductance mechanosensitive channel. (267 aa)
EDM29233.1Hypothetical protein. (1230 aa)
EDM25520.1COG3264 Small-conductance mechanosensitive channel. (1110 aa)
EDM26268.1Transcriptional regulator (FUR family) protein; COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family. (132 aa)
EDM26293.1Hypothetical protein; COG0668 Small-conductance mechanosensitive channel. (363 aa)
EDM25150.1Transcriptional regulator, IclR family protein; COG1414 Transcriptional regulator. (244 aa)
EDM25636.1Hypothetical protein; COG1695 Predicted transcriptional regulators. (113 aa)
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.