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| | rpsR | 30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (75 aa) |
| | rplI | 50S ribosomal protein L9; Binds to the 23S rRNA. (206 aa) |
| | rpmF | COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. (68 aa) |
| | ihfA | Integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (92 aa) |
| | EAU47556.1 | Hypothetical protein. (141 aa) |
| | EAU44023.1 | Hypothetical protein; COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes. (56 aa) |
| | EAU45991.1 | COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family. (502 aa) |
| | EAU45964.1 | Hypothetical protein. (187 aa) |
| | EAU45390.1 | ParB-like partition protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family. (315 aa) |
| | EAU45397.1 | Predicted transcriptional regulator. (91 aa) |
| | EAU45398.1 | Putative mucR family transcriptional regulatory protein. (142 aa) |
| | EAU45409.1 | Hypothetical protein. (618 aa) |
| | EAU47922.1 | Hypothetical protein. (422 aa) |
| | EAU47978.1 | Ser/Thr protein phosphatase family protein; COG2891 Cell shape-determining protein. (387 aa) |
| | EAU47996.1 | COG1850 Ribulose 1,5-bisphosphate carboxylase, large subunit; Belongs to the RuBisCO large chain family. (421 aa) |
| | EAU48413.1 | Hypothetical protein; COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases. (244 aa) |
| | EAU48425.1 | Hypothetical protein; COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases. (243 aa) |
| | EAU48446.1 | Hypothetical protein. (142 aa) |
| | EAU47031.1 | Putative sulfotransferase protein. (279 aa) |
| | gfa | Glutathione-dependent formaldehyde-activating enzyme; Catalyzes the condensation of formaldehyde and glutathione to S-hydroxymethylglutathione; Belongs to the Gfa family. (208 aa) |
| | EAU47074.1 | ParB-like partition protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family. (326 aa) |
| | EAU47160.1 | Esterase/lipase/thioesterase; COG0657 Esterase/lipase. (303 aa) |
| | EAU43478.1 | Putative DNA-binding protein; COG1475 Predicted transcriptional regulators. (368 aa) |
| | EAU47710.1 | COG2801 Transposase and inactivated derivatives. (114 aa) |
| | EAU47742.1 | COG2801 Transposase and inactivated derivatives. (405 aa) |
| | EAU47757.1 | Probable replication protein B; COG1475 Predicted transcriptional regulators; Belongs to the ParB family. (309 aa) |
| | EAU47759.1 | Hypothetical protein; COG1475 Predicted transcriptional regulators. (723 aa) |
| | EAU47793.1 | COG0081 Ribosomal protein L1. (343 aa) |
| | EAU47820.1 | Rep B partitioning protein/ParB-like protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family. (318 aa) |
| | EAU47825.1 | Putative transposase; COG1484 DNA replication protein. (237 aa) |
| | EAU44302.1 | Transposion helper protein, ATP-binding protein; COG1484 DNA replication protein. (274 aa) |
| | EAU44337.1 | Chromosome partitioning protein, ParB; COG1475 Predicted transcriptional regulators; Belongs to the ParB family. (346 aa) |
| | EAU43621.1 | Transposion helper protein, ATP-binding protein; COG1484 DNA replication protein. (274 aa) |
| | EAU43631.1 | COG2003 DNA repair proteins; Belongs to the UPF0758 family. (168 aa) |
| | EAU46026.1 | Hypothetical protein. (336 aa) |
| | EAU44710.1 | COG4584 Transposase and inactivated derivatives. (445 aa) |
| | EAU44711.1 | Transposase; COG1484 DNA replication protein. (289 aa) |
| | EAU44733.1 | COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase. (434 aa) |
| | EAU44074.1 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (553 aa) |
| | kynU | Probable kyurenine hydrolase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. (397 aa) |
| | rpmJ | COG0257 Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. (41 aa) |
| | ihfB | Integration host factor beta subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (93 aa) |
| | EAU44246.1 | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (553 aa) |
| | EAU45659.1 | Helicase, putative; COG0513 Superfamily II DNA and RNA helicases. (989 aa) |
| | EAU45660.1 | Hypothetical protein; COG0457 FOG: TPR repeat. (169 aa) |
| | EAU45668.1 | C4-type zinc finger protein, DksA/TraR family; COG1734 DnaK suppressor protein. (89 aa) |
| | EAU45688.1 | TPR domain protein; COG0457 FOG: TPR repeat. (185 aa) |
| | EAU45689.1 | Lipoprotein, putative; COG0457 FOG: TPR repeat. (286 aa) |
| | rplO | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (156 aa) |
| | rpsK | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (130 aa) |
| | rplQ | COG0203 Ribosomal protein L17. (139 aa) |
| | rpmD | COG1841 Ribosomal protein L30/L7E. (62 aa) |
| | rpsE | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (192 aa) |
| | rplR | Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (119 aa) |
| | EAU43987.1 | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center. (152 aa) |
| | rpsH | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (130 aa) |
| | rpsN | Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa) |
| | rplE | Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (186 aa) |
| | rplX | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (103 aa) |
| | rplN | Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa) |
| | rpsQ | Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (76 aa) |
| | rpmC | COG0255 Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. (68 aa) |
| | rplP | 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (137 aa) |
| | rpsC | 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (236 aa) |
| | rplV | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (126 aa) |
| | rpsS | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa) |
| | rplB | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (280 aa) |
| | rplW | Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (89 aa) |
| | EAU46311.1 | COG0088 Ribosomal protein L4. (177 aa) |
| | rplC | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (280 aa) |
| | rpsJ | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (102 aa) |
| | rpsG | 30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa) |
| | rplL | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (126 aa) |
| | rplJ | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (164 aa) |
| | EAU46355.1 | COG0863 DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family. (367 aa) |
| | EAU46362.1 | Hypothetical protein. (219 aa) |
| | EAU46378.1 | Putative DNA topoisomerase I protein; COG3569 Topoisomerase IB. (328 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (653 aa) |
| | EAU45759.1 | Helicase, ATP-dependent, putative; COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member. (511 aa) |
| | EAU44844.1 | DNA-binding protein HU; COG0776 Bacterial nucleoid DNA-binding protein; Belongs to the bacterial histone-like protein family. (95 aa) |
| | EAU44862.1 | COG0184 Ribosomal protein S15P/S13E; Belongs to the universal ribosomal protein uS15 family. (69 aa) |
| | EAU44869.1 | COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease. (215 aa) |
| | priA | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (729 aa) |
| | EAU46087.1 | ATP:cob(I)alamin adenosyltransferase, putative; Belongs to the Cob(I)alamin adenosyltransferase family. (190 aa) |
| | rpsD | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (206 aa) |
| | EAU43888.1 | Hypothetical protein; Belongs to the SOS response-associated peptidase family. (219 aa) |
| | EAU44097.1 | COG0514 Superfamily II DNA helicase. (684 aa) |
| | EAU44125.1 | Hypothetical protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (235 aa) |
| | EAU44984.1 | Possible TolA protein. (379 aa) |
| | EAU45155.1 | Glutathione-dependent formaldehyde-activating, GFA. (125 aa) |
| | recO | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (242 aa) |
| | EAU45172.1 | Hypothetical protein. (137 aa) |
| | EAU46810.1 | COG4302 Ethanolamine ammonia-lyase, small subunit; Belongs to the EutC family. (264 aa) |
| | EAU46811.1 | COG4303 Ethanolamine ammonia-lyase, large subunit. (463 aa) |
| | EAU48105.1 | COG2003 DNA repair proteins; Belongs to the UPF0758 family. (253 aa) |
| | infB | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (822 aa) |
| | recF | Recombination protein F; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (369 aa) |
| | dnaA | Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (451 aa) |
| | rpsT | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. (87 aa) |
| | dnaQ | Putative DNA polymerase III, epsilon subunit and related 3'-5' exonuclease; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. (229 aa) |
| | EAU48227.1 | Chromosome partitioning protein parB; COG1475 Predicted transcriptional regulators; Belongs to the ParB family. (303 aa) |
| | EAU48276.1 | Hypothetical protein; COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases. (325 aa) |
| | EAU45484.1 | Chain length determinant protein, putative; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis. (441 aa) |
| | EAU46436.1 | Hypothetical protein. (236 aa) |
| | EAU46438.1 | Hypothetical protein. (324 aa) |
| | nth | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (214 aa) |
| | hpf | Ribosomal subunit interface protein, putative; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (187 aa) |
| | EAU46455.1 | Hypothetical protein. (475 aa) |
| | EAU46511.1 | Transposion helper protein, ATP-binding protein; COG1484 DNA replication protein. (140 aa) |
| | EAU46512.1 | Transposase; COG1484 DNA replication protein. (241 aa) |
| | EAU46513.1 | COG4584 Transposase and inactivated derivatives. (445 aa) |
| | rpmE | 50S ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily. (73 aa) |
| | rpsP | COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. (124 aa) |
| | smc | SMC protein; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1151 aa) |
| | EAU46764.1 | Hypothetical protein. (153 aa) |
| | EAU43819.1 | COG3931 Predicted N-formylglutamate amidohydrolase. (245 aa) |
| | rpmI-2 | COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. (66 aa) |
| | dtd | D-tyrosyl-tRNA deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (146 aa) |
| | EAU45247.1 | COG4260 Putative virion core protein (lumpy skin disease virus). (378 aa) |
| | EAU45276.1 | Hypothetical protein. (137 aa) |
| | rpmH | COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. (44 aa) |
| | EAU46929.1 | COG4451 Ribulose bisphosphate carboxylase small subunit. (139 aa) |
| | cbbL | Ribulose-bisphosphate carboxylase form I large subunit CbbL; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. (487 aa) |
| | EAU45546.1 | Class II aldolase/adducin-like protein; COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases. (256 aa) |
| | EAU45553.1 | Putative ATP-dependent RNA helicase protein; COG0513 Superfamily II DNA and RNA helicases. (430 aa) |
| | recR | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (197 aa) |
| | EAU43392.1 | Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (66 aa) |
| | EAU46573.1 | Hypothetical protein. (126 aa) |
| | rpmB | COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. (96 aa) |
| | cobB-2 | COG0846 NAD-dependent protein deacetylases, SIR2 family; Belongs to the sirtuin family. Class III subfamily. (229 aa) |
| | rpsU | COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (68 aa) |
| | EAU46634.1 | Hypothetical protein; COG0593 ATPase involved in DNA replication initiation. (233 aa) |
| | EAU47592.1 | Hypothetical Membrane Spanning Protein. (505 aa) |
| | EAU47593.1 | Virulence-associated protein E; COG0358 DNA primase (bacterial type). (289 aa) |
| | EAU47614.1 | Putative transposase; COG1484 DNA replication protein. (233 aa) |
| | ackA | Acetate/propionate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (396 aa) |
| | EAU45843.1 | COG1850 Ribulose 1,5-bisphosphate carboxylase, large subunit; Belongs to the RuBisCO large chain family. (421 aa) |
| | rpmG | COG0267 Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. (55 aa) |
| | edd | Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (601 aa) |
| | EAU43613.1 | Ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (178 aa) |
| | EAU45085.1 | Hypothetical protein; COG3378 Predicted ATPase. (605 aa) |
| | EAU45087.1 | Hypothetical protein; COG0358 DNA primase (bacterial type). (372 aa) |
| | guaB | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (482 aa) |
| | EAU44916.1 | Cobalt chelatase, CobS small subunit; COG0714 MoxR-like ATPases. (327 aa) |
| | EAU44923.1 | Hypothetical protein; COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases. (264 aa) |
| | EAU43568.1 | COG0457 FOG: TPR repeat. (889 aa) |
| | EAU43569.1 | Hypothetical protein. (411 aa) |
| | EAU44635.1 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (494 aa) |
| | EAU44662.1 | Hypothetical protein. (444 aa) |
| | EAU44665.1 | Transposion helper protein, ATP-binding protein; COG1484 DNA replication protein. (255 aa) |
| | rpmA | COG0211 Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. (89 aa) |
| | EAU45364.1 | 30S ribosomal protein S2. (199 aa) |
| | rpsB | COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (255 aa) |
| | rpsI | COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (162 aa) |
| | rplM | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (152 aa) |
| | rpsF | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (118 aa) |
