STRINGSTRING
EDQ00406.1 EDQ00406.1 EDQ01358.1 EDQ01358.1 EDQ01357.1 EDQ01357.1 EDQ02512.1 EDQ02512.1 EDP99287.1 EDP99287.1 EDQ01282.1 EDQ01282.1 EDP99352.1 EDP99352.1 EDQ00430.1 EDQ00430.1 napA napA EDQ01048.1 EDQ01048.1 PetA PetA EDQ00993.1 EDQ00993.1 EDQ00930.1 EDQ00930.1 Mtr Mtr EDQ01362.1 EDQ01362.1 EDQ01361.1 EDQ01361.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EDQ00406.1Quinone-reactive Ni/Fe hydrogenase, small subunit precursor; COG1740 Ni,Fe-hydrogenase I small subunit. (378 aa)
EDQ01358.1Formate dehydrogenase, alpha subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (949 aa)
EDQ01357.1Hypothetical protein. (66 aa)
EDQ02512.1Flavocytochrome c flavin subunit, putative. (76 aa)
EDP99287.1TtrB; COG0437 Fe-S-cluster-containing hydrogenase components 1. (231 aa)
EDQ01282.1trimethylamine-N-oxide reductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (830 aa)
EDP99352.1Twin-arginine translocation pathway signal; COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs. (946 aa)
EDQ00430.1Copper-resistance protein CopA; COG2132 Putative multicopper oxidases. (653 aa)
napAAnaerobic dehydrogenase, typically selenocysteine-containing; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. (829 aa)
EDQ01048.1Isoquinoline 1-oxidoreductase, beta subunit, putative; COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs. (139 aa)
PetAUbiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (196 aa)
EDQ00993.1Alkaline phosphatase, putative; COG3540 Phosphodiesterase/alkaline phosphatase D. (166 aa)
EDQ00930.1Renal dipeptidase family protein. (84 aa)
MtrTryptophan-specific transport protein; COG0814 Amino acid permeases. (418 aa)
EDQ01362.1Formate dehydrogenase, alpha subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (951 aa)
EDQ01361.1Hypothetical protein. (65 aa)
Your Current Organism:
Shewanella benthica
NCBI taxonomy Id: 314608
Other names: S. benthica KT99, Shewanella benthica KT99, Shewanella benthica str. KT99, Shewanella benthica strain KT99
Server load: low (20%) [HD]