STRINGSTRING
RF_1366 RF_1366 ampC ampC RF_1368 RF_1368 RF_1369 RF_1369 phnP phnP RF_1372 RF_1372 dinJ dinJ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RF_1366Conserved hypothetical protein. (231 aa)
ampCBeta-lactamase AmpC (Class C). (372 aa)
RF_1368Cytotoxic translational repressor of toxin-antitoxin system RelE; COG2026. (40 aa)
RF_1369Antitoxin of toxin-antitoxin system StbD; Antitoxin component of a type II toxin-antitoxin (TA) system. (83 aa)
phnPMetal-dependent hydrolases of the beta-lactamase superfamily I. (254 aa)
RF_1372Unknown. (226 aa)
dinJDNA-damage-inducible protein J. (87 aa)
Your Current Organism:
Rickettsia felis
NCBI taxonomy Id: 315456
Other names: R. felis URRWXCal2, Rickettsia felis URRWXCal2, Rickettsia felis str. URRWXCal2, Rickettsia felis strain URRWXCal2
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