STRINGSTRING
BPUM_0021 BPUM_0021 BPUM_0028 BPUM_0028 BPUM_0031 BPUM_0031 mfd mfd BPUM_0064 BPUM_0064 BPUM_0068 BPUM_0068 BPUM_0083 BPUM_0083 nusG nusG BPUM_0157 BPUM_0157 BPUM_0160 BPUM_0160 BPUM_0161 BPUM_0161 BPUM_0174 BPUM_0174 BPUM_0177 BPUM_0177 BPUM_0189 BPUM_0189 BPUM_0200 BPUM_0200 BPUM_0208 BPUM_0208 BPUM_0214 BPUM_0214 BPUM_0215 BPUM_0215 BPUM_0226 BPUM_0226 BPUM_0235 BPUM_0235 BPUM_0238 BPUM_0238 BPUM_0251 BPUM_0251 BPUM_0279 BPUM_0279 BPUM_0292 BPUM_0292 BPUM_0295 BPUM_0295 BPUM_0326 BPUM_0326 BPUM_0333 BPUM_0333 BPUM_0353 BPUM_0353 BPUM_0358 BPUM_0358 BPUM_0360 BPUM_0360 BPUM_0361 BPUM_0361 BPUM_0384 BPUM_0384 BPUM_0388 BPUM_0388 BPUM_0397 BPUM_0397 ALS35544.1 ALS35544.1 BPUM_0418 BPUM_0418 BPUM_0438 BPUM_0438 BPUM_0440 BPUM_0440 BPUM_0441 BPUM_0441 BPUM_0444 BPUM_0444 rsbW rsbW BPUM_0446 BPUM_0446 BPUM_0455 BPUM_0455 BPUM_0459 BPUM_0459 BPUM_0462 BPUM_0462 BPUM_0464 BPUM_0464 BPUM_0472 BPUM_0472 BPUM_0474 BPUM_0474 BPUM_0484 BPUM_0484 BPUM_0486 BPUM_0486 BPUM_0494 BPUM_0494 BPUM_0506 BPUM_0506 rex rex BPUM_0549 BPUM_0549 BPUM_0557 BPUM_0557 BPUM_0581 BPUM_0581 BPUM_0583 BPUM_0583 BPUM_0584 BPUM_0584 BPUM_0588 BPUM_0588 BPUM_0589 BPUM_0589 BPUM_0591 BPUM_0591 BPUM_0611 BPUM_0611 BPUM_0619 BPUM_0619 BPUM_0647 BPUM_0647 BPUM_0659 BPUM_0659 BPUM_0663 BPUM_0663 BPUM_0668 BPUM_0668 BPUM_0672 BPUM_0672 BPUM_0692 BPUM_0692 BPUM_0708 BPUM_0708 BPUM_0713 BPUM_0713 BPUM_0730 BPUM_0730 BPUM_0743 BPUM_0743 BPUM_0754 BPUM_0754 BPUM_0758 BPUM_0758 BPUM_0766 BPUM_0766 BPUM_0773 BPUM_0773 BPUM_0780 BPUM_0780 BPUM_0781 BPUM_0781 BPUM_0786 BPUM_0786 BPUM_0803 BPUM_0803 BPUM_0807 BPUM_0807 BPUM_0827 BPUM_0827 BPUM_0862 BPUM_0862 BPUM_0881 BPUM_0881 BPUM_0887 BPUM_0887 BPUM_0893 BPUM_0893 BPUM_0902 BPUM_0902 BPUM_0905 BPUM_0905 BPUM_0907 BPUM_0907 hpr hpr BPUM_0961 BPUM_0961 BPUM_0981 BPUM_0981 BPUM_1014 BPUM_1014 spxA spxA BPUM_1122 BPUM_1122 BPUM_1126 BPUM_1126 BPUM_1135 BPUM_1135 BPUM_1138 BPUM_1138 BPUM_1148 BPUM_1148 BPUM_1177 BPUM_1177 BPUM_1195 BPUM_1195 BPUM_1200 BPUM_1200 BPUM_1212 BPUM_1212 BPUM_1219 BPUM_1219 BPUM_1227 BPUM_1227 BPUM_1230 BPUM_1230 BPUM_1233 BPUM_1233 BPUM_1234 BPUM_1234 sigI sigI BPUM_1247 BPUM_1247 BPUM_1258 BPUM_1258 BPUM_1277 BPUM_1277 BPUM_1278 BPUM_1278 BPUM_1290 BPUM_1290 BPUM_1310 BPUM_1310 BPUM_1334 BPUM_1334 BPUM_1344 BPUM_1344 BPUM_1345 BPUM_1345 mraZ mraZ BPUM_1426 BPUM_1426 BPUM_1427 BPUM_1427 BPUM_1428 BPUM_1428 BPUM_1430 BPUM_1430 BPUM_1440 BPUM_1440 BPUM_1473 BPUM_1473 fapR fapR codY codY BPUM_1546 BPUM_1546 nusA nusA BPUM_1586 BPUM_1586 BPUM_1590 BPUM_1590 hfq hfq BPUM_1636 BPUM_1636 BPUM_1670 BPUM_1670 BPUM_1679 BPUM_1679 BPUM_1683 BPUM_1683 lexA lexA BPUM_1717 BPUM_1717 BPUM_1722 BPUM_1722 BPUM_1729 BPUM_1729 BPUM_1730 BPUM_1730 BPUM_1740 BPUM_1740 BPUM_1743 BPUM_1743 BPUM_1746 BPUM_1746 BPUM_1754 BPUM_1754 BPUM_1758 BPUM_1758 BPUM_1765 BPUM_1765 BPUM_1771 BPUM_1771 BPUM_1774 BPUM_1774 BPUM_1789 BPUM_1789 BPUM_1791 BPUM_1791 BPUM_1815 BPUM_1815 BPUM_1818 BPUM_1818 BPUM_1840 BPUM_1840 BPUM_1841 BPUM_1841 BPUM_1843 BPUM_1843 BPUM_1875 BPUM_1875 BPUM_1893 BPUM_1893 BPUM_1902 BPUM_1902 BPUM_1912 BPUM_1912 BPUM_1930 BPUM_1930 birA birA mtrB mtrB BPUM_2042 BPUM_2042 BPUM_2044 BPUM_2044 BPUM_2045 BPUM_2045 BPUM_2064 BPUM_2064 BPUM_2076 BPUM_2076 spoIIAB spoIIAB BPUM_2078 BPUM_2078 BPUM_2084 BPUM_2084 BPUM_2114 BPUM_2114 BPUM_2117 BPUM_2117 BPUM_2149 BPUM_2149 BPUM_2154 BPUM_2154 argR argR nusB nusB mntR mntR BPUM_2193 BPUM_2193 BPUM_2206 BPUM_2206 BPUM_2207 BPUM_2207 BPUM_2241 BPUM_2241 sigA sigA BPUM_2257 BPUM_2257 hrcA hrcA BPUM_2309 BPUM_2309 BPUM_2330 BPUM_2330 BPUM_2334 BPUM_2334 BPUM_2352 BPUM_2352 greA greA BPUM_2393 BPUM_2393 BPUM_2429 BPUM_2429 BPUM_2494 BPUM_2494 BPUM_2495 BPUM_2495 BPUM_2497 BPUM_2497 BPUM_2512 BPUM_2512 BPUM_2552 BPUM_2552 BPUM_2553 BPUM_2553 BPUM_2572 BPUM_2572 BPUM_2590 BPUM_2590 BPUM_2592 BPUM_2592 BPUM_2598 BPUM_2598 BPUM_2608 BPUM_2608 BPUM_2620 BPUM_2620 BPUM_2647 BPUM_2647 BPUM_2661 BPUM_2661 BPUM_2662 BPUM_2662 BPUM_2677 BPUM_2677 BPUM_2736 BPUM_2736 BPUM_2772 BPUM_2772 BPUM_2777 BPUM_2777 BPUM_2808 BPUM_2808 BPUM_2821 BPUM_2821 BPUM_2837 BPUM_2837 BPUM_2882 BPUM_2882 BPUM_2916 BPUM_2916 BPUM_2921 BPUM_2921 BPUM_2939 BPUM_2939 BPUM_2953 BPUM_2953 BPUM_2956 BPUM_2956 BPUM_2963 BPUM_2963 BPUM_2974 BPUM_2974 BPUM_2986 BPUM_2986 BPUM_2989 BPUM_2989 BPUM_2998 BPUM_2998 BPUM_3005 BPUM_3005 BPUM_3015 BPUM_3015 BPUM_3023 BPUM_3023 BPUM_3035 BPUM_3035 BPUM_3036 BPUM_3036 BPUM_3037 BPUM_3037 BPUM_3038 BPUM_3038 BPUM_3039 BPUM_3039 BPUM_3044 BPUM_3044 BPUM_3058 BPUM_3058 BPUM_3061 BPUM_3061 BPUM_3062 BPUM_3062 BPUM_3063 BPUM_3063 BPUM_3084 BPUM_3084 BPUM_3132 BPUM_3132 BPUM_3140 BPUM_3140 BPUM_3152 BPUM_3152 BPUM_3155 BPUM_3155 BPUM_3162 BPUM_3162 BPUM_3192 BPUM_3192 BPUM_3198 BPUM_3198 BPUM_3235 BPUM_3235 BPUM_3245 BPUM_3245 BPUM_3263 BPUM_3263 BPUM_3270 BPUM_3270 BPUM_3291 BPUM_3291 BPUM_3292 BPUM_3292 rpoE rpoE BPUM_3414 BPUM_3414 BPUM_3453 BPUM_3453 BPUM_3469 BPUM_3469 BPUM_3485 BPUM_3485 BPUM_3507 BPUM_3507 BPUM_3514 BPUM_3514 BPUM_3529 BPUM_3529 BPUM_3541 BPUM_3541 BPUM_3549 BPUM_3549 BPUM_3550 BPUM_3550 BPUM_3558 BPUM_3558 BPUM_3567 BPUM_3567 BPUM_3583 BPUM_3583 BPUM_3588 BPUM_3588 BPUM_3594 BPUM_3594 BPUM_3596 BPUM_3596 BPUM_3603 BPUM_3603 BPUM_3611 BPUM_3611 BPUM_3612 BPUM_3612 BPUM_3632 BPUM_3632 BPUM_3633 BPUM_3633 BPUM_3642 BPUM_3642 BPUM_3647 BPUM_3647 BPUM_3648 BPUM_3648 BPUM_3650 BPUM_3650 BPUM_3653 BPUM_3653 BPUM_3663 BPUM_3663 BPUM_3667 BPUM_3667 BPUM_3670 BPUM_3670 BPUM_3689 BPUM_3689 BPUM_3694 BPUM_3694 BPUM_3700 BPUM_3700 BPUM_3710 BPUM_3710
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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BPUM_0021Transition state regulator Abh. (94 aa)
BPUM_0028ABC transporter permease. (85 aa)
BPUM_0031Transcriptional regulator. (277 aa)
mfdTranscription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1177 aa)
BPUM_0064XRE family transcriptional regulator. (77 aa)
BPUM_0068CtsR family transcriptional regulator; Belongs to the CtsR family. (154 aa)
BPUM_0083DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; Belongs to the sigma-70 factor family. (218 aa)
nusGAntitermination protein NusG; Participates in transcription elongation, termination and antitermination. (177 aa)
BPUM_0157RpiR family transcriptional regulator. (289 aa)
BPUM_0160RNA polymerase subunit sigma; Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription: this protein is involved in detoxification and protection against antimicrobial; Belongs to the sigma-70 factor family. ECF subfamily. (187 aa)
BPUM_0161Anti-sigma factor. (208 aa)
BPUM_0174GntR family transcriptional regulator. (123 aa)
BPUM_0177XRE family transcriptional regulator. (71 aa)
BPUM_0189Cytoplasmic protein. (86 aa)
BPUM_0200MarR family transcriptional regulator. (152 aa)
BPUM_0208Transcription antiterminator LicT. (278 aa)
BPUM_0214Transcription antiterminator. (639 aa)
BPUM_0215Fructokinase. (294 aa)
BPUM_0226PadR family transcriptional regulator. (105 aa)
BPUM_0235Transcriptional regulator. (187 aa)
BPUM_0238MarR family transcriptional regulator. (145 aa)
BPUM_0251LuxR family transcriptional regulator. (233 aa)
BPUM_0279NTD biosynthesis operon regulator NtdR. (329 aa)
BPUM_0292Transcriptional regulator. (335 aa)
BPUM_0295LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (301 aa)
BPUM_0326GntR family transcriptional regulator. (445 aa)
BPUM_0333Transcriptional regulator. (94 aa)
BPUM_0353LuxR family transcriptional regulator. (227 aa)
BPUM_0358Transcriptional regulator. (299 aa)
BPUM_0360ArsR family transcriptional regulator. (103 aa)
BPUM_0361GntR family transcriptional regulator. (474 aa)
BPUM_0384IclR family transcriptional regulator. (253 aa)
BPUM_0388PTS sugar transporter subunit IIA. (695 aa)
BPUM_0397GntR family transcriptional regulator. (224 aa)
ALS35544.1Transcriptional regulator. (140 aa)
BPUM_0418Chemotaxis protein CheY. (227 aa)
BPUM_0438Antitoxin endoai. (93 aa)
BPUM_0440RsbT co-antagonist protein RsbRA. (276 aa)
BPUM_0441RsbT antagonist protein RsbS. (122 aa)
BPUM_0444Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family. (109 aa)
rsbWSerine/threonine protein kinase; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B). (162 aa)
BPUM_0446RNA polymerase sigma-B factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase. (262 aa)
BPUM_0455Acetoin dehydrogenase. (615 aa)
BPUM_0459Cold-shock protein. (67 aa)
BPUM_0462Transcriptional regulator. (133 aa)
BPUM_0464TetR family transcriptional regulator. (192 aa)
BPUM_0472MarR family transcriptional regulator. (150 aa)
BPUM_0474TetR family transcriptional regulator. (201 aa)
BPUM_0484TetR family transcriptional regulator. (183 aa)
BPUM_0486Transcriptional regulator. (157 aa)
BPUM_0494LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (297 aa)
BPUM_0506GntR family transcriptional regulator. (492 aa)
rexRedox-sensing transcriptional repressor Rex; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. (217 aa)
BPUM_0549Hypothetical protein. (372 aa)
BPUM_0557Hypothetical protein. (92 aa)
BPUM_0581AraC family transcriptional regulator. (352 aa)
BPUM_0583Transcriptional regulator. (295 aa)
BPUM_0584Transcriptional regulator. (290 aa)
BPUM_0588RNA polymerase; Belongs to the sigma-70 factor family. ECF subfamily. (181 aa)
BPUM_0589Hypothetical protein. (482 aa)
BPUM_0591LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (298 aa)
BPUM_0611Transcriptional regulator. (552 aa)
BPUM_0619Hypothetical protein. (104 aa)
BPUM_0647TetR family transcriptional regulator. (281 aa)
BPUM_0659RpiR family transcriptional regulator. (254 aa)
BPUM_0663Rrf2 family transcriptional regulator. (145 aa)
BPUM_0668RpiR family transcriptional regulator. (243 aa)
BPUM_0672LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (302 aa)
BPUM_0692MerR family transcriptional regulator. (141 aa)
BPUM_0708Transcriptional regulator. (232 aa)
BPUM_0713PadR family transcriptional regulator. (185 aa)
BPUM_0730Transcriptional regulator. (242 aa)
BPUM_0743Hypothetical protein. (239 aa)
BPUM_0754TetR family transcriptional regulator. (188 aa)
BPUM_0758Transcriptional regulator. (275 aa)
BPUM_0766Transcriptional regulator. (502 aa)
BPUM_0773TetR family transcriptional regulator. (192 aa)
BPUM_0780RNA polymerase subunit sigma-70; Belongs to the sigma-70 factor family. ECF subfamily. (188 aa)
BPUM_0781Anti-sigma factor. (248 aa)
BPUM_0786MarR family transcriptional regulator. (159 aa)
BPUM_0803Hypothetical protein. (155 aa)
BPUM_0807RNA polymerase subunit sigma-70. (200 aa)
BPUM_0827Fur family transcriptional regulator; Belongs to the Fur family. (145 aa)
BPUM_0862Cold-shock protein. (66 aa)
BPUM_0881Glycerol-3-phosphate responsive antiterminator GlpP; Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA. (185 aa)
BPUM_0887LuxR family transcriptional regulator. (216 aa)
BPUM_0893Rrf2 family transcriptional regulator. (143 aa)
BPUM_0902RNA polymerase subunit sigma; Belongs to the sigma-70 factor family. ECF subfamily. (163 aa)
BPUM_0905MerR family transcriptional regulator. (146 aa)
BPUM_0907Transcriptional regulator. (130 aa)
hprTranscriptional regulator Hpr; Negative regulator of protease production and sporulation. (206 aa)
BPUM_0961TetR family transcriptional regulator. (192 aa)
BPUM_0981GntR family transcriptional regulator. (479 aa)
BPUM_1014AraC family transcriptional regulator. (288 aa)
spxAArsR family transcriptional regulator; Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development- promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress. Belongs to the ArsC family. Spx subfamily. (131 aa)
BPUM_1122HxlR family transcriptional regulator. (112 aa)
BPUM_1126MarR family transcriptional regulator. (148 aa)
BPUM_1135LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (291 aa)
BPUM_1138LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (298 aa)
BPUM_1148TetR family transcriptional regulator. (204 aa)
BPUM_1177Transcriptional regulator. (318 aa)
BPUM_1195PadR family transcriptional regulator. (108 aa)
BPUM_1200Cysteine methyltransferase. (347 aa)
BPUM_1212MarR family transcriptional regulator. (148 aa)
BPUM_1219PhoB family transcriptional regulator. (228 aa)
BPUM_1227Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (287 aa)
BPUM_1230MerR family transcriptional regulator. (109 aa)
BPUM_1233MarR family transcriptional regulator. (153 aa)
BPUM_1234Hypothetical protein. (807 aa)
sigIRNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily. (251 aa)
BPUM_1247Sporulation kinase. (731 aa)
BPUM_1258Transcriptional regulator. (151 aa)
BPUM_1277LacI family transcriptional regulator. (342 aa)
BPUM_1278PtsGHI operon antiterminator. (284 aa)
BPUM_1290Sporulation kinase. (609 aa)
BPUM_1310LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (293 aa)
BPUM_1334DeoR family transcriptional regulator. (251 aa)
BPUM_1344AbrB family transcriptional regulator. (92 aa)
BPUM_1345Sporulation kinase. (436 aa)
mraZCell division protein MraZ; Belongs to the MraZ family. (143 aa)
BPUM_1426Sporulation sigma factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (239 aa)
BPUM_1427RNA polymerase sigma-G factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (259 aa)
BPUM_1428Transcriptional regulator. (312 aa)
BPUM_1430Transcriptional regulator. (143 aa)
BPUM_1440RNA-binding protein. (258 aa)
BPUM_147316S rRNA methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. (447 aa)
fapRFatty acid biosynthesis transcriptional regulator; Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism. (188 aa)
codYTranscriptional repressor CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family. (259 aa)
BPUM_1546RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (255 aa)
nusATranscription elongation factor NusA; Participates in both transcription termination and antitermination. (371 aa)
BPUM_1586GntR family transcriptional regulator. (241 aa)
BPUM_1590MarR family transcriptional regulator. (158 aa)
hfqRNA-binding protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. (73 aa)
BPUM_1636MerR family transcriptional regulator. (136 aa)
BPUM_1670Rrf2 family transcriptional regulator. (137 aa)
BPUM_1679TetR family transcriptional regulator. (192 aa)
BPUM_1683RsbT co-antagonist protein RsbRB. (282 aa)
lexAXRE family transcriptional regulator; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (206 aa)
BPUM_1717MarR family transcriptional regulator. (143 aa)
BPUM_1722HxlR family transcriptional regulator. (114 aa)
BPUM_1729MarR family transcriptional regulator. (141 aa)
BPUM_1730TetR family transcriptional regulator. (189 aa)
BPUM_1740Transcriptional regulator. (132 aa)
BPUM_1743Transcription antiterminator. (280 aa)
BPUM_1746Transcriptional regulator. (235 aa)
BPUM_1754Transcriptional regulator. (346 aa)
BPUM_1758PTS N-acetylgalactosamine transporter subunit IID. (678 aa)
BPUM_1765MarR family transcriptional regulator. (139 aa)
BPUM_1771RpiR family transcriptional regulator. (258 aa)
BPUM_1774Crp/Fnr family transcriptional regulator. (226 aa)
BPUM_1789DNA-binding protein. (254 aa)
BPUM_1791Carbohydrate diacid regulator. (377 aa)
BPUM_1815LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (300 aa)
BPUM_1818MerR family transcriptional regulator. (273 aa)
BPUM_1840Transcriptional regulator. (157 aa)
BPUM_1841Transcriptional regulator. (310 aa)
BPUM_1843ArsR family transcriptional regulator. (109 aa)
BPUM_1875HxlR family transcriptional regulator. (110 aa)
BPUM_1893AAA family ATPase. (458 aa)
BPUM_1902MarR family transcriptional regulator. (143 aa)
BPUM_1912Fis family transcriptional regulator. (322 aa)
BPUM_1930Cold-shock protein. (66 aa)
birAbiotin--acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. (327 aa)
mtrBTranscription attenuation protein MtrB; Required for transcription attenuation control in the Trp operon. This trans-acting factor seems to recognize a 10 bases nucleotide sequence in the Trp leader transcript causing transcription termination. Binds the leader RNA only in presence of L-tryptophan. Belongs to the MtrB family. (76 aa)
BPUM_2042RNA polymerase subunit sigma; Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in B. subtilis has been shown to regulate cell envelope modification and may effect antibiotic resistance; Belongs to the sigma-70 factor family. ECF subfamily. (202 aa)
BPUM_2044Histidine kinase. (593 aa)
BPUM_2045Transcriptional regulator. (240 aa)
BPUM_2064Transcriptional regulator. (193 aa)
BPUM_2076RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (255 aa)
spoIIABAnti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. (146 aa)
BPUM_2078Anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family. (117 aa)
BPUM_2084Fur family transcriptional regulator; Belongs to the Fur family. (150 aa)
BPUM_2114Aminotransferase. (435 aa)
BPUM_2117GntR family transcriptional regulator. (240 aa)
BPUM_2149AAA family ATPase. (690 aa)
BPUM_2154Chemotaxis protein CheY; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. (267 aa)
argRArginine repressor; Regulates arginine biosynthesis genes. (149 aa)
nusBAntitermination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. (131 aa)
mntRManganese transport transcriptional regulator; Central regulator of manganese homeostasis. Belongs to the DtxR/MntR family. (144 aa)
BPUM_2193Transcriptional regulator. (113 aa)
BPUM_2206RsbT co-antagonist protein RsbRD. (290 aa)
BPUM_2207Transcriptional regulator; Belongs to the ArsC family. (126 aa)
BPUM_2241Fur family transcriptional regulator; Belongs to the Fur family. (142 aa)
sigARNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (373 aa)
BPUM_2257Transcriptional repressor CcpN. (232 aa)
hrcAHrcA family transcriptional regulator; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. (343 aa)
BPUM_2309RNA polymerase subunit sigma-70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (247 aa)
BPUM_2330GntR family transcriptional regulator. (366 aa)
BPUM_2334HxlR family transcriptional regulator. (118 aa)
BPUM_2352LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (297 aa)
greATranscription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. (157 aa)
BPUM_2393Rrf2 family transcriptional regulator. (139 aa)
BPUM_2429Transcriptional regulator. (180 aa)
BPUM_2494MarR family transcriptional regulator. (146 aa)
BPUM_2495LuxR family transcriptional regulator. (74 aa)
BPUM_2497LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (286 aa)
BPUM_2512TetR family transcriptional regulator. (194 aa)
BPUM_2552Alkaline phosphatase. (580 aa)
BPUM_2553Chemotaxis protein CheY. (242 aa)
BPUM_2572Hypothetical protein. (440 aa)
BPUM_2590Transcriptional regulator. (199 aa)
BPUM_2592PhoB family transcriptional regulator. (258 aa)
BPUM_2598Transcriptional regulator. (148 aa)
BPUM_2608Transcriptional regulator. (221 aa)
BPUM_2620Catabolite control protein A. (333 aa)
BPUM_2647Alkaline phosphatase. (73 aa)
BPUM_2661AraC family transcriptional regulator. (766 aa)
BPUM_2662HxlR family transcriptional regulator. (123 aa)
BPUM_2677GntR family transcriptional regulator. (130 aa)
BPUM_2736Transcriptional regulator; Belongs to the GbsR family. (185 aa)
BPUM_2772Fis family transcriptional regulator; Positive regulatory protein that acts at the late promoter PL. (172 aa)
BPUM_2777XRE family transcriptional regulator. (125 aa)
BPUM_2808AsnC family transcriptional regulator. (166 aa)
BPUM_2821Response regulator in two-component regulatory system with DcuS; phosphorylated DcuR activates transcription of genes involved in anaerobic fumarate respiration. (235 aa)
BPUM_2837Transcriptional regulator. (213 aa)
BPUM_2882Hypothetical protein. (76 aa)
BPUM_2916DNA-binding response regulator. (231 aa)
BPUM_2921Transcriptional regulator. (310 aa)
BPUM_2939Hypothetical protein; Belongs to the ArsC family. (118 aa)
BPUM_2953Transcriptional regulator. (225 aa)
BPUM_2956TetR family transcriptional regulator. (292 aa)
BPUM_2963LuxR family transcriptional regulator. (211 aa)
BPUM_2974Transcriptional regulator. (598 aa)
BPUM_2986LacI family transcriptional regulator. (336 aa)
BPUM_2989Transcriptional regulator. (240 aa)
BPUM_2998MarR family transcriptional regulator. (142 aa)
BPUM_3005Fructokinase. (289 aa)
BPUM_3015TetR family transcriptional regulator. (202 aa)
BPUM_3023Transcriptional regulator. (101 aa)
BPUM_3035Transition state regulator Abh. (96 aa)
BPUM_3036Transcriptional regulator. (76 aa)
BPUM_3037XRE family transcriptional regulator. (134 aa)
BPUM_3038XRE family transcriptional regulator. (132 aa)
BPUM_3039MarR family transcriptional regulator. (106 aa)
BPUM_3044MarR family transcriptional regulator; Belongs to the GbsR family. (178 aa)
BPUM_3058Hypothetical protein. (345 aa)
BPUM_3061AAA family ATPase. (461 aa)
BPUM_3062GntR family transcriptional regulator. (245 aa)
BPUM_3063RNA polymerase sigma-54 factor. (434 aa)
BPUM_3084Transcriptional regulator. (156 aa)
BPUM_3132Rrf2 family transcriptional regulator. (142 aa)
BPUM_3140Phosphonate metabolism transcriptional regulator PhnF. (241 aa)
BPUM_3152TetR family transcriptional regulator. (190 aa)
BPUM_3155Transcriptional regulator. (228 aa)
BPUM_3162HxlR family transcriptional regulator. (121 aa)
BPUM_3192Flagellar biosynthesis protein FlgM. (87 aa)
BPUM_3198Chemotaxis protein CheY. (229 aa)
BPUM_3235Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family. (316 aa)
BPUM_3245LacI family transcriptional regulator. (336 aa)
BPUM_3263LacI family transcriptional regulator. (328 aa)
BPUM_3270LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (298 aa)
BPUM_3291Stage III sporulation protein D. (92 aa)
BPUM_3292MarR family transcriptional regulator. (137 aa)
rpoEDNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. (179 aa)
BPUM_3414Transcriptional regulator. (283 aa)
BPUM_3453Levansucrase. (277 aa)
BPUM_3469AraC family transcriptional regulator. (281 aa)
BPUM_3485LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (295 aa)
BPUM_3507PTS fructose transporter subunit IIA. (648 aa)
BPUM_3514RNA polymerase subunit sigma; Belongs to the sigma-70 factor family. ECF subfamily. (176 aa)
BPUM_3529HxlR family transcriptional regulator. (110 aa)
BPUM_3541Transcriptional regulator. (652 aa)
BPUM_3549XRE family transcriptional regulator. (115 aa)
BPUM_3550XRE family transcriptional regulator. (155 aa)
BPUM_3558RpiR family transcriptional regulator. (286 aa)
BPUM_3567Transcription antiterminator LicT. (277 aa)
BPUM_3583MarR family transcriptional regulator. (147 aa)
BPUM_3588RNA polymerase subunit sigma-70. (314 aa)
BPUM_3594LuxR family transcriptional regulator. (335 aa)
BPUM_3596Transcriptional regulator. (119 aa)
BPUM_3603RpiR family transcriptional regulator. (285 aa)
BPUM_3611LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (299 aa)
BPUM_3612LacI family transcriptional regulator. (331 aa)
BPUM_3632Sugar diacid utilization regulator. (370 aa)
BPUM_3633TetR family transcriptional regulator. (216 aa)
BPUM_3642Transcription antiterminator BglG. (282 aa)
BPUM_3647Transcriptional regulator. (183 aa)
BPUM_3648Transcriptional regulator. (160 aa)
BPUM_3650XRE family transcriptional regulator. (68 aa)
BPUM_3653LacI family transcriptional regulator. (340 aa)
BPUM_3663GntR family transcriptional regulator. (236 aa)
BPUM_3667LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (290 aa)
BPUM_3670Crp/Fnr family transcriptional regulator. (181 aa)
BPUM_3689PhoP family transcriptional regulator. (235 aa)
BPUM_3694TetR family transcriptional regulator. (193 aa)
BPUM_3700AraC family transcriptional regulator. (538 aa)
BPUM_3710RNA polymerase subunit sigma-70; Belongs to the sigma-70 factor family. ECF subfamily. (164 aa)
Your Current Organism:
Bacillus pumilus
NCBI taxonomy Id: 315750
Other names: B. pumilus SAFR-032, Bacillus pumilus SAFR-032, Bacillus pumilus str. SAFR-032, Bacillus pumilus strain SAFR-032
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