STRINGSTRING
trpB-2 trpB-2 RPE_1467 RPE_1467 RPE_1630 RPE_1630 RPE_2185 RPE_2185 RPE_2188 RPE_2188 RPE_4759 RPE_4759
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
trpB-2Pyridoxal-phosphate dependent TrpB-like enzyme; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (454 aa)
RPE_1467L-threonine ammonia-lyase; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: rpc:RPC_1447 pyridoxal-5'-phosphate-dependent enzyme, beta subunit. (345 aa)
RPE_1630PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bja:blr5707 putative threonine aldolase. (355 aa)
RPE_2185KEGG: rpb:RPB_3347 phosphoserine phosphatase SerB:HAD-superfamily hydrolase subfamily IB, PSPase-like; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase. (283 aa)
RPE_2188PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: rpc:RPC_3254 pyridoxal-5'-phosphate-dependent enzyme, beta subunit. (329 aa)
RPE_4759KEGG: rpc:RPC_4795 threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit. (473 aa)
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.