STRINGSTRING
RPE_1707 RPE_1707 RPE_1783 RPE_1783 RPE_2253 RPE_2253 RPE_3779 RPE_3779 RPE_4911 RPE_4911
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPE_1707PFAM: AMP-dependent synthetase and ligase; KEGG: rpc:RPC_4074 AMP-dependent synthetase and ligase. (563 aa)
RPE_1783PFAM: AMP-dependent synthetase and ligase; KEGG: rpa:RPA1766 acyl-CoA synthase. (514 aa)
RPE_2253PFAM: AMP-dependent synthetase and ligase; KEGG: rpb:RPB_3261 AMP-dependent synthetase and ligase. (533 aa)
RPE_3779PFAM: AMP-dependent synthetase and ligase; KEGG: rpa:RPA3716 pimeloyl-CoA ligase. (558 aa)
RPE_4911PFAM: AMP-dependent synthetase and ligase; KEGG: rpb:RPB_4700 AMP-dependent synthetase and ligase. (516 aa)
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.