STRINGSTRING
RPE_0624 RPE_0624 RPE_1207 RPE_1207 RPE_3865 RPE_3865 RPE_3866 RPE_3866 RPE_4751 RPE_4751 RPE_4752 RPE_4752 RPE_4756 RPE_4756
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPE_0624PFAM: cytochrome c oxidase, subunit III; KEGG: bja:blr3212 nitric oxide reductase subunit E. (197 aa)
RPE_1207Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (175 aa)
RPE_3865PFAM: cytochrome c oxidase, subunit II; KEGG: rpc:RPC_3849 cytochrome c oxidase, subunit II. (560 aa)
RPE_3866PFAM: cytochrome c oxidase, subunit I; KEGG: rpc:RPC_3850 cytochrome-c oxidase; Belongs to the heme-copper respiratory oxidase family. (841 aa)
RPE_4751Cytochrome-c oxidase; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (283 aa)
RPE_4752Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (546 aa)
RPE_4756PFAM: cytochrome c oxidase, subunit III; KEGG: rpc:RPC_4792 cytochrome c oxidase, subunit III. (285 aa)
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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