STRINGSTRING
RPE_3868 RPE_3868 RPE_3869 RPE_3869 RPE_3870 RPE_3870 RPE_3871 RPE_3871 RPE_3872 RPE_3872 RPE_3873 RPE_3873
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPE_3868TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: rpc:RPC_3852 Na+/H+ antiporter subunit. (141 aa)
RPE_3869PFAM: multiple resistance and pH regulation protein F; KEGG: rpc:RPC_3853 multiple resistance and pH regulation protein F. (89 aa)
RPE_3870PFAM: cation antiporter; KEGG: rpc:RPC_3854 cation antiporter. (162 aa)
RPE_3871NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rpc:RPC_3855 NADH dehydrogenase (quinone). (511 aa)
RPE_3872PFAM: NADH-ubiquinone oxidoreductase, chain 4L; KEGG: rpc:RPC_3856 NADH-ubiquinone oxidoreductase, chain 4L. (122 aa)
RPE_3873NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); Na+/H+ antiporter MnhB subunit-related protein; KEGG: rpc:RPC_3857 NADH dehydrogenase (quinone). (966 aa)
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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