STRINGSTRING
RPE_3094 RPE_3094 nosZ nosZ RPE_3096 RPE_3096 RPE_3097 RPE_3097 RPE_3098 RPE_3098 RPE_3099 RPE_3099
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPE_3094PFAM: FMN-binding domain protein; KEGG: rpb:RPB_3141 FMN-binding. (748 aa)
nosZNitrous-oxide reductase; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family. (648 aa)
RPE_3096PFAM: periplasmic copper-binding; SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: rpb:RPB_3143 periplasmic copper-binding. (456 aa)
RPE_3097PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_3144 ABC transporter related. (301 aa)
RPE_3098KEGG: rpb:RPB_3145 nitrous oxide metabolic protein. (275 aa)
RPE_3099PFAM: NosL family protein; KEGG: rpc:RPC_0432 NosL. (182 aa)
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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