STRINGSTRING
RPE_0757 RPE_0757 RPE_1256 RPE_1256 RPE_1257 RPE_1257 RPE_1258 RPE_1258 RPE_1259 RPE_1259 RPE_1260 RPE_1260 RPE_1261 RPE_1261 RPE_1262 RPE_1262 RPE_1263 RPE_1263 RPE_1264 RPE_1264 RPE_1265 RPE_1265 RPE_1266 RPE_1266 RPE_1267 RPE_1267 RPE_2416 RPE_2416 RPE_3192 RPE_3192 ssuD ssuD RPE_3194 RPE_3194 ssuB ssuB RPE_3196 RPE_3196 RPE_3205 RPE_3205 RPE_3363 RPE_3363 RPE_3771 RPE_3771 RPE_3857 RPE_3857 RPE_3858 RPE_3858 RPE_3859 RPE_3859 RPE_3889 RPE_3889 RPE_3890 RPE_3890 RPE_3891 RPE_3891 RPE_4071 RPE_4071 RPE_4636 RPE_4636 RPE_4637 RPE_4637 RPE_4638 RPE_4638
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPE_0757PFAM: 2-nitropropane dioxygenase, NPD; KEGG: rpd:RPD_0976 2-nitropropane dioxygenase, NPD. (322 aa)
RPE_1256KEGG: rpc:RPC_1208 hypothetical protein. (85 aa)
RPE_1257KEGG: rpd:RPD_4184 hypothetical protein. (175 aa)
RPE_1258Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rpb:RPB_1752 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. (897 aa)
RPE_1259Sulfite reductase (NADPH) alpha subunit; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; KEGG: rpb:RPB_1753 oxidoreductase, FAD/NAD(P)-binding. (538 aa)
RPE_1260TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: rpa:RPA3710 possible ferredoxin-nitrite reductase. (586 aa)
RPE_1261Assimilatory nitrate reductase (NADH) beta subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: rpb:RPB_1755 FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (409 aa)
RPE_1262PFAM: globin; KEGG: rpb:RPB_1756 globin; Belongs to the globin family. (140 aa)
RPE_1263KEGG: rpb:RPB_1758 nitrate transport ATP-binding subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase. (264 aa)
RPE_1264TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_1759 nitrate transport permease. (299 aa)
RPE_1265ABC-type nitrate transport system periplasmic component; TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpb:RPB_1760 twin-arginine translocation pathway signal. (435 aa)
RPE_1266KEGG: rpc:RPC_1210 putative nitrate transporter component, NrtA. (388 aa)
RPE_1267PFAM: response regulator receiver; ANTAR domain protein; KEGG: rpc:RPC_1211 response regulator receiver (CheY-like) and ANTAR domain protein. (194 aa)
RPE_2416PFAM: NADPH-dependent FMN reductase; KEGG: rpb:RPB_2517 NADPH-dependent FMN reductase. (196 aa)
RPE_3192KEGG: rpa:RPA2608 possible sulfonate binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein, family 3. (318 aa)
ssuDAlkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. (391 aa)
RPE_3194PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA2611 putative aliphatic sulfonate transport membrane component. permease subunit of an ABC transporter. (268 aa)
ssuBABC transporter related; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. (281 aa)
RPE_3196PFAM: flavin reductase domain protein, FMN-binding; KEGG: bja:bll7007 putative oxidoreductase. (190 aa)
RPE_3205KEGG: pst:PSPTO2423 ABC transporter, periplasmic substrate-binding protein, aliphatic sulfonates family; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein, family 3. (322 aa)
RPE_3363PFAM: 2-nitropropane dioxygenase, NPD; KEGG: rpa:RPA3112 2-nitropropane dioxygenase. (359 aa)
RPE_3771PFAM: luciferase family protein; KEGG: rpc:RPC_3733 luciferase-like. (339 aa)
RPE_3857PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpa:RPA0131 putative sulfonate transport system ATP-binding protein. (240 aa)
RPE_3858PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA0132 ABC sulfonate transport system, permease protein. (258 aa)
RPE_3859TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpa:RPA0133 ABC sulfate transport system, periplasmic binding protein. (335 aa)
RPE_3889TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpc:RPC_1931 ABC sulfate transport system, periplasmic binding protein. (330 aa)
RPE_3890PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_1932 binding-protein-dependent transport systems inner membrane component. (278 aa)
RPE_3891PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1933 ABC transporter related. (241 aa)
RPE_4071Nitrite reductase, copper-containing; KEGG: bja:blr7089 respiratory nitrite reductase; TIGRFAM: nitrite reductase, copper-containing; PFAM: multicopper oxidase, type 1; multicopper oxidase, type 2; multicopper oxidase, type 3. (366 aa)
RPE_4636PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_2056 ABC transporter related. (306 aa)
RPE_4637TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_2055 nitrate transport permease. (279 aa)
RPE_4638ABC-type nitrate transport system periplasmic component; TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpb:RPB_2054 twin-arginine translocation pathway signal. (462 aa)
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.