STRINGSTRING
RPE_0527 RPE_0527 RPE_0528 RPE_0528 RPE_0529 RPE_0529 RPE_3126 RPE_3126 RPE_3127 RPE_3127 RPE_3128 RPE_3128
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPE_0527PFAM: transport system permease protein; KEGG: rpc:RPC_0085 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (349 aa)
RPE_0528PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_0086 ABC transporter related. (260 aa)
RPE_0529PFAM: periplasmic binding protein; KEGG: rpc:RPC_0087 periplasmic binding protein. (278 aa)
RPE_3126PFAM: periplasmic binding protein; KEGG: rpc:RPC_4256 periplasmic binding protein. (277 aa)
RPE_3127PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_2923 ABC transporter related. (260 aa)
RPE_3128PFAM: transport system permease protein; KEGG: rpd:RPD_2924 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (339 aa)
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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