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RPE_0397 RPE_0397 RPE_0519 RPE_0519 RPE_0520 RPE_0520 RPE_0521 RPE_0521 RPE_2545 RPE_2545 lolD lolD RPE_3320 RPE_3320 RPE_3321 RPE_3321 RPE_3322 RPE_3322 lolD-2 lolD-2 RPE_3953 RPE_3953 RPE_3954 RPE_3954
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPE_0397Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). (282 aa)
RPE_0519KEGG: rpb:RPB_4688 hypothetical protein. (360 aa)
RPE_0520PFAM: protein of unknown function DUF214; KEGG: rpc:RPC_0079 protein of unknown function DUF214. (821 aa)
RPE_0521PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_0080 ABC transporter related. (227 aa)
RPE_2545TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: rpc:RPC_2428 lipoprotein releasing system, transmembrane protein, LolC/E family. (426 aa)
lolDABC transporter related; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (236 aa)
RPE_3320PFAM: protein of unknown function DUF214; KEGG: dde:Dde_0827 ABC transporter, permease protein, putative. (405 aa)
RPE_3321PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvu:DVUA0022 ABC transporter, ATP-binding protein. (241 aa)
RPE_3322PFAM: secretion protein HlyD family protein; KEGG: aba:Acid345_4021 secretion protein HlyD. (350 aa)
lolD-2ABC transporter related; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (225 aa)
RPE_3953PFAM: protein of unknown function DUF214; KEGG: rpa:RPA1649 predicted ABC-type transport systems, involved in lipoprotein release, permease components. (408 aa)
RPE_3954TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpd:RPD_1469 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (425 aa)
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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