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RPE_1320 RPE_1320 RPE_0232 RPE_0232 RPE_0519 RPE_0519 RPE_1306 RPE_1306 RPE_1307 RPE_1307 RPE_1327 RPE_1327 RPE_1328 RPE_1328 RPE_1329 RPE_1329 RPE_1336 RPE_1336 RPE_1337 RPE_1337 RPE_1338 RPE_1338 RPE_1339 RPE_1339 RPE_1346 RPE_1346 bchN bchN bchB bchB bchL bchL acsF acsF RPE_2065 RPE_2065 RPE_2376 RPE_2376 RPE_2580 RPE_2580 RPE_3935 RPE_3935 RPE_3936 RPE_3936
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPE_1320PFAM: hydroxyneurosporene synthase; KEGG: rpc:RPC_1288 hydroxyneurosporene synthase. (343 aa)
RPE_0232SMART: von Willebrand factor, type A; KEGG: rpa:RPA0569 hypothetical protein. (372 aa)
RPE_0519KEGG: rpb:RPB_4688 hypothetical protein. (360 aa)
RPE_1306Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. (340 aa)
RPE_1307Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. (591 aa)
RPE_1327KEGG: rpc:RPC_1293 chlorophyllide reductase iron protein subunit X; TIGRFAM: chlorophyllide reductase iron protein subunit X; PFAM: NifH/frxC-family protein; Belongs to the NifH/BchL/ChlL family. (331 aa)
RPE_1328TIGRFAM: chlorophyllide reductase subunit Y; PFAM: oxidoreductase/nitrogenase, component 1; KEGG: rpc:RPC_1294 chlorophyllide reductase subunit Y. (529 aa)
RPE_1329TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase, component 1; protein of unknown function DUF1197; KEGG: rpc:RPC_1295 chlorophyllide reductase subunit Z. (482 aa)
RPE_1336TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: rpb:RPB_3992 bacteriochlorophyll/chlorophyll synthetase. (297 aa)
RPE_1337PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rpc:RPC_1303 PucC protein. (449 aa)
RPE_1338TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: rpb:RPB_3990 geranylgeranyl reductase. (401 aa)
RPE_1339TspO and MBR like proteins; PFAM: TspO/MBR family protein; KEGG: rpc:RPC_1305 TspO and MBR like proteins. (162 aa)
RPE_1346PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: rpc:RPC_1312 2-vinyl bacteriochlorophyllide hydratase. (175 aa)
bchNLight-independent protochlorophyllide reductase, N subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. (427 aa)
bchBLight-independent protochlorophyllide reductase, B subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex. (531 aa)
bchLLight-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. (310 aa)
acsFMg-protoporphyrin IX monomethyl ester (oxidative) cyclase; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family. (364 aa)
RPE_2065KEGG: rpb:RPB_1951 hypothetical protein. (170 aa)
RPE_2376PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpc:RPC_2983 short-chain dehydrogenase/reductase SDR. (291 aa)
RPE_2580Conserved hypothetical protein; TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpb:RPB_1951 hypothetical protein. (172 aa)
RPE_3935KEGG: rpd:RPD_1487 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; TIGRFAM: magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB. (560 aa)
RPE_3936TIGRFAM: bacteriochlorophyll 4-vinyl reductase; PFAM: 4-vinyl reductase, 4VR; KEGG: rpc:RPC_3813 bacteriochlorophyll 4-vinyl reductase. (240 aa)
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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