STRINGSTRING
RPE_0015 RPE_0015 RPE_0018 RPE_0018 RPE_0510 RPE_0510 RPE_0622 RPE_0622 RPE_1713 RPE_1713 RPE_1714 RPE_1714 RPE_2525 RPE_2525 RPE_2527 RPE_2527 RPE_2913 RPE_2913 RPE_3077 RPE_3077 RPE_3525 RPE_3525 RPE_3865 RPE_3865 RPE_3866 RPE_3866 RPE_4648 RPE_4648 RPE_4649 RPE_4649 RPE_4752 RPE_4752
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPE_0015Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (293 aa)
RPE_0018TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase, subunit I; KEGG: rpc:RPC_0015 cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family. (548 aa)
RPE_0510PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: rpb:RPB_0327 succinate dehydrogenase, cytochrome b subunit. (132 aa)
RPE_0622KEGG: bja:blr3214 nitric oxide reductase subunit C. (150 aa)
RPE_1713PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; KEGG: rpc:RPC_4068 NADH dehydrogenase (ubiquinone), 24 kDa subunit. (157 aa)
RPE_1714PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: rpc:RPC_4067 NADH dehydrogenase (quinone). (428 aa)
RPE_2525KEGG: rpc:RPC_2406 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit. (249 aa)
RPE_2527NADH-quinone oxidoreductase, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (441 aa)
RPE_2913PFAM: ETC complex I subunit conserved region; KEGG: rpb:RPB_2935 ETC complex I subunit conserved region. (111 aa)
RPE_3077KEGG: rpd:RPD_4257 hypothetical protein. (219 aa)
RPE_3525PFAM: Pyrrolo-quinoline quinone; KEGG: rpb:RPB_2355 pyrrolo-quinoline quinone. (726 aa)
RPE_3865PFAM: cytochrome c oxidase, subunit II; KEGG: rpc:RPC_3849 cytochrome c oxidase, subunit II. (560 aa)
RPE_3866PFAM: cytochrome c oxidase, subunit I; KEGG: rpc:RPC_3850 cytochrome-c oxidase; Belongs to the heme-copper respiratory oxidase family. (841 aa)
RPE_4648PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: rpc:RPC_4646 NADH dehydrogenase (quinone). (518 aa)
RPE_4649PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; KEGG: rpc:RPC_4647 NADH dehydrogenase (ubiquinone), 24 kDa subunit. (160 aa)
RPE_4752Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (546 aa)
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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