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| | RPE_1714 | PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: rpc:RPC_4067 NADH dehydrogenase (quinone). (428 aa) |
| | RPE_0018 | TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase, subunit I; KEGG: rpc:RPC_0015 cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family. (548 aa) |
| | RPE_0227 | PFAM: ABC-2 type transporter; KEGG: rpc:RPC_0357 ABC-2. (269 aa) |
| | atpC | ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (135 aa) |
| | atpD | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (476 aa) |
| | atpG | ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (292 aa) |
| | atpA | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (510 aa) |
| | atpH | ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. (186 aa) |
| | RPE_0429 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_0177 ABC transporter related. (314 aa) |
| | ugpE | Binding-protein-dependent transport systems inner membrane component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (282 aa) |
| | RPE_0510 | PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: rpb:RPB_0327 succinate dehydrogenase, cytochrome b subunit. (132 aa) |
| | RPE_0526 | PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rpd:RPD_4390 TonB-dependent receptor. (702 aa) |
| | RPE_0535 | SMART: extracellular solute-binding protein, family 3; KEGG: rpa:RPA4797 ABC transporter, amino acid binding protein; Belongs to the bacterial solute-binding protein 3 family. (347 aa) |
| | RPE_0956 | PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; NADH dehydrogenase (ubiquinone), 30 kDa subunit; KEGG: rpc:RPC_0933 NADH-ubiquinone oxidoreductase, chain 49kDa. (502 aa) |
| | RPE_1091 | PFAM: polysaccharide export protein; KEGG: gme:Gmet_1444 polysaccharide export protein. (190 aa) |
| | RPE_1095 | TIGRFAM: eight transmembrane protein EpsH; KEGG: gme:Gmet_1503 hypothetical protein. (540 aa) |
| | RPE_1471 | PFAM: protein of unknown function DUF140; KEGG: rpc:RPC_1452 protein of unknown function DUF140. (377 aa) |
| | RPE_1668 | PFAM: ABC-2 type transporter; KEGG: rpd:RPD_1794 ABC-2. (388 aa) |
| | nuoC | NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family. (581 aa) |
| | RPE_1713 | PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; KEGG: rpc:RPC_4068 NADH dehydrogenase (ubiquinone), 24 kDa subunit. (157 aa) |
| | RPE_1737 | Protein of unknown function DUF140; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; protein of unknown function DUF140; KEGG: rpc:RPC_4043 protein of unknown function DUF140. (382 aa) |
| | RPE_1742 | PFAM: cyclic nucleotide-binding; Ion transport protein; Ion transport 2 domain protein,; KEGG: rpc:RPC_4038 cyclic nucleotide-binding domain (cNMP-BD) protein. (408 aa) |
| | cysA | Sulfate ABC transporter, ATPase subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (349 aa) |
| | RPE_1968 | TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: rpc:RPC_1949 cobalt ABC transporter CbiQ, permease subunit. (267 aa) |
| | RPE_1970 | PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: rpc:RPC_1951 cobalamin (vitamin B12) biosynthesis CbiM protein. (211 aa) |
| | RPE_2051 | TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: rpb:RPB_1928 phosphonate-binding periplasmic protein. (331 aa) |
| | RPE_2131 | PFAM: ABC-2 type transporter; KEGG: rpc:RPC_3284 ABC-2. (253 aa) |
| | RPE_2201 | PFAM: binding-protein-dependent transport systems inner membrane component; Substrate-binding region of ABC-type glycine betaine transport system; KEGG: rpc:RPC_3244 substrate-binding region of ABC-type glycine betaine transport system. (516 aa) |
| | RPE_2231 | KEGG: rru:Rru_A0458 hypothetical protein. (225 aa) |
| | RPE_2319 | Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. (492 aa) |
| | RPE_2489 | KEGG: rsp:RSP_3808 hypothetical protein. (283 aa) |
| | RPE_2525 | KEGG: rpc:RPC_2406 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit. (249 aa) |
| | RPE_2527 | NADH-quinone oxidoreductase, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (441 aa) |
| | RPE_2632 | Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. (497 aa) |
| | tatA | Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (78 aa) |
| | tatB | Twin-arginine translocation protein, TatB subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. (175 aa) |
| | tatC | Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. (274 aa) |
| | RPE_2729 | TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein, family 3; KEGG: rpc:RPC_2549 lysine-arginine-ornithine-binding periplasmic protein; Belongs to the bacterial solute-binding protein 3 family. (337 aa) |
| | RPE_2730 | TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_2550 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine. (401 aa) |
| | RPE_2731 | TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_2551 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine. (500 aa) |
| | RPE_2793 | PFAM: extracellular solute-binding protein, family 5; KEGG: rpc:RPC_2613 extracellular solute-binding protein, family 5. (617 aa) |
| | RPE_2818 | PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: bja:bll6183 hypothetical protein. (785 aa) |
| | RPE_2837 | PFAM: ABC-3 protein; KEGG: jan:Jann_2083 ABC-3. (312 aa) |
| | RPE_2838 | ABC-3 protein; PFAM: transport system permease protein; ABC-3 protein; KEGG: jan:Jann_2082 ABC-3. (402 aa) |
| | RPE_2839 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sil:SPO3365 zinc/manganese/iron ABC transporter, ATP-binding protein. (276 aa) |
| | RPE_2844 | PFAM: polysaccharide export protein; KEGG: rpc:RPC_4940 polysaccharide export protein. (201 aa) |
| | RPE_3114 | TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: rpb:RPB_4085 phosphonate-binding periplasmic protein. (302 aa) |
| | RPE_3232 | KEGG: sil:SPO2719 hypothetical protein. (67 aa) |
| | RPE_3292 | PFAM: permease YjgP/YjgQ family protein; KEGG: rpc:RPC_2313 permease YjgP/YjgQ. (388 aa) |
| | RPE_3293 | PFAM: permease YjgP/YjgQ family protein; KEGG: rpc:RPC_2312 permease YjgP/YjgQ. (361 aa) |
| | RPE_3462 | KEGG: rpc:RPC_2915 hypothetical protein. (621 aa) |
| | RPE_3483 | PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rpd:RPD_2482 TonB-dependent receptor. (727 aa) |
| | RPE_3496 | PFAM: polysaccharide export protein; KEGG: sme:SMb21073 putative OMA family outer membrane saccharide export protein, similar to ExoF. (537 aa) |
| | RPE_3634 | PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: rpc:RPC_4610 PBS lyase heat-like repeat. (214 aa) |
| | RPE_3669 | PFAM: Carbohydrate-selective porin OprB; KEGG: rpc:RPC_3629 carbohydrate-selective porin OprB. (445 aa) |
| | RPE_3671 | PFAM: iron permease FTR1; KEGG: rpc:RPC_3631 iron permease FTR1. (279 aa) |
| | RPE_3766 | PFAM: extracellular solute-binding protein, family 5; KEGG: rpc:RPC_3728 extracellular solute-binding protein, family 5. (629 aa) |
| | RPE_3767 | Extracellular solute-binding protein; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 5; KEGG: rpc:RPC_3729 extracellular solute-binding protein, family 5. (632 aa) |
| | potA | Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (382 aa) |
| | RPE_4249 | PFAM: ABC-2 type transporter; KEGG: dde:Dde_0841 polysaccharide ABC transporter, permease protein. (276 aa) |
| | RPE_4292 | TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: rpc:RPC_1961 cobalt ABC transporter CbiQ, permease subunit. (265 aa) |
| | RPE_4294 | PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: rpc:RPC_1959 cobalamin (vitamin B12) biosynthesis CbiM protein. (207 aa) |
| | RPE_4648 | PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: rpc:RPC_4646 NADH dehydrogenase (quinone). (518 aa) |
| | RPE_4649 | PFAM: NADH dehydrogenase (ubiquinone), 24 kDa subunit; KEGG: rpc:RPC_4647 NADH dehydrogenase (ubiquinone), 24 kDa subunit. (160 aa) |
| | RPE_4664 | PFAM: ABC-2 type transporter; KEGG: rpc:RPC_4663 ABC-2. (372 aa) |
| | RPE_4685 | PFAM: ABC-2 type transporter; KEGG: bja:blr6191 ABC transporter permease protein. (281 aa) |
| | atpF1 | H+-transporting two-sector ATPase, B/B' subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (164 aa) |
| | atpF2 | H+-transporting two-sector ATPase, B/B' subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (By similarity). (181 aa) |
| | atpE | H+-transporting two-sector ATPase, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (75 aa) |
| | atpB | ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. (249 aa) |
| | RPE_4791 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_4828 ABC transporter related. (253 aa) |
| | RPE_4792 | PFAM: ABC-3 protein; KEGG: rpc:RPC_4829 ABC-3. (292 aa) |
| | RPE_4891 | Phosphate ABC transporter, periplasmic phosphate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. (337 aa) |
| | RPE_4917 | PFAM: polysaccharide export protein; KEGG: rpc:RPC_4940 polysaccharide export protein. (240 aa) |
