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| | RPE_3204 | KEGG: dsy:DSY0244 hypothetical protein. (478 aa) |
| | guaB | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (497 aa) |
| | RPE_3282 | Regulatory inactivation of DnaA Hda protein; KEGG: rpc:RPC_2328 chromosomal replication initiator, DnaA; Belongs to the DnaA family. (224 aa) |
| | rpsF | SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA. (157 aa) |
| | rpsR | SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (79 aa) |
| | rplI | LSU ribosomal protein L9P; Binds to the 23S rRNA. (194 aa) |
| | RPE_3317 | Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (498 aa) |
| | RPE_3319 | KEGG: rpa:RPA3084 replicative DNA helicase (dnaB). (85 aa) |
| | RPE_3337 | KEGG: jan:Jann_2415 hypothetical protein. (170 aa) |
| | rpmG | PFAM: ribosomal protein L33; KEGG: rpa:RPA3129 50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. (55 aa) |
| | RPE_3443 | KEGG: rpd:RPD_3099 hypothetical protein. (112 aa) |
| | RPE_3539 | Hypothetical protein. (143 aa) |
| | RPE_3556 | Recombination protein MgsA; PFAM: magnesium chelatase, ChlI subunit; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rpb:RPB_2324 AAA_5 ATPase. (442 aa) |
| | RPE_3559 | PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: rpc:RPC_3420 glutathione-dependent formaldehyde-activating, GFA. (154 aa) |
| | rplQ | PFAM: ribosomal protein L17; KEGG: rpd:RPD_3159 ribosomal protein L17. (136 aa) |
| | rpsK | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (129 aa) |
| | rplO | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (161 aa) |
| | rpmD | PFAM: ribosomal protein L30; KEGG: rpc:RPC_3430 ribosomal protein L30. (64 aa) |
| | rpsE | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. (190 aa) |
| | rplR | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (120 aa) |
| | rplF | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (177 aa) |
| | rpsH | SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (132 aa) |
| | rpsN | SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa) |
| | rplE | LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (185 aa) |
| | rplX | LSU ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (104 aa) |
| | rplN | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa) |
| | rpsQ | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (82 aa) |
| | rpmC | PFAM: ribosomal protein L29; KEGG: rpa:RPA3242 50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. (68 aa) |
| | rplP | LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. (137 aa) |
| | rpsC | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (232 aa) |
| | rplV | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). (128 aa) |
| | rpsS | SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa) |
| | rplB | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (277 aa) |
| | rplW | LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (99 aa) |
| | rplD | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. (206 aa) |
| | rplC | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. (240 aa) |
| | rpsJ | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (102 aa) |
| | rpsG | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa) |
| | rpsL | SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. (140 aa) |
| | rplL | LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (123 aa) |
| | rplJ | LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (172 aa) |
| | RPE_3665 | KEGG: rpc:RPC_3624 hypothetical protein. (187 aa) |
| | RPE_3678 | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; PFAM: ribulose bisphosphate carboxylase, large chain; KEGG: rpc:RPC_2184 ribulose 1 5-bisphosphate carboxylase large subunit-like. (368 aa) |
| | RPE_3726 | KEGG: rpd:RPD_3492 hypothetical protein. (117 aa) |
| | RPE_3742 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: rpc:RPC_3703 DEAD/DEAH box helicase-like; Belongs to the DEAD box helicase family. (490 aa) |
| | RPE_3757 | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rpc:RPC_3719 tetratricopeptide TPR_2. (265 aa) |
| | RPE_3846 | PFAM: histone family protein DNA-binding protein; KEGG: rpc:RPC_3750 histone-like DNA-binding protein; Belongs to the bacterial histone-like protein family. (99 aa) |
| | ackA-2 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (414 aa) |
| | RPE_3932 | PFAM: protein kinase; UspA domain protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rpc:RPC_3809 serine/threonine protein kinase. (482 aa) |
| | RPE_4041 | KEGG: rpc:RPC_3918 hypothetical protein. (343 aa) |
| | RPE_4043 | PFAM: ParB domain protein nuclease; KEGG: rpc:RPC_3920 ParB-like nuclease. (703 aa) |
| | RPE_4045 | PFAM: histone family protein DNA-binding protein; KEGG: rpc:RPC_3750 histone-like DNA-binding protein; Belongs to the bacterial histone-like protein family. (99 aa) |
| | rpsU | PFAM: ribosomal protein S21; KEGG: rpc:RPC_3962 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (99 aa) |
| | rpmJ | TIGRFAM: ribosomal protein L36; KEGG: rpc:RPC_3989 ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. (41 aa) |
| | RPE_4156 | PFAM: Rubrerythrin; protein of unknown function DUF125, transmembrane; KEGG: rpd:RPD_3902 rubrerythrin. (327 aa) |
| | RPE_4236 | PFAM: N-acetylneuraminic acid synthase, N-terminal domain; KEGG: dre:322780 zgc:77126. (357 aa) |
| | RPE_4240 | TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: sco:SCO4880 transferase. (174 aa) |
| | RPE_4257 | PFAM: transferase hexapeptide repeat containing protein; KEGG: mag:amb0053 acetyltransferase. (225 aa) |
| | RPE_4321 | PFAM: protein of unknown function DUF477; KEGG: rpc:RPC_1334 protein of unknown function DUF477. (294 aa) |
| | RPE_4370 | PFAM: protein of unknown function DUF88; KEGG: rpa:RPA3960 hypothetical protein. (253 aa) |
| | RPE_4376 | ATPase-like protein; KEGG: lic:LIC13201 adenylate/guanylate cyclase. (1347 aa) |
| | RPE_4382 | KEGG: nfa:nfa55970 hypothetical protein. (412 aa) |
| | RPE_4383 | PFAM: protein of unknown function DUF159; KEGG: rpc:RPC_4325 protein of unknown function DUF159; Belongs to the SOS response-associated peptidase family. (258 aa) |
| | RPE_4431 | PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rpc:RPC_4366 DNA methylase N-4/N-6; Belongs to the N(4)/N(6)-methyltransferase family. (379 aa) |
| | smc | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1154 aa) |
| | RPE_4468 | KEGG: zmo:ZMO1548 squalene--hopene cyclase; TIGRFAM: squalene/oxidosqualene cyclases; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase. (685 aa) |
| | RPE_4503 | PFAM: ADP-ribosylation/Crystallin J1; SMART: protein tyrosine phosphatase, catalytic region; KEGG: rpc:RPC_0422 ADP-ribosylation/crystallin J1. (493 aa) |
| | RPE_4630 | PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: bja:bll5043 hypothetical protein. (1007 aa) |
| | gfa | Glutathione-dependent formaldehyde-activating, GFA; Catalyzes the condensation of formaldehyde and glutathione to S-hydroxymethylglutathione; Belongs to the Gfa family. (189 aa) |
| | RPE_4708 | Putative TolA; KEGG: rpc:RPC_4752 putative TolA. (314 aa) |
| | recR | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (201 aa) |
| | RPE_4812 | Conserved hypothetical protein 103; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (105 aa) |
| | RPE_4850 | TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: rpc:RPC_4881 ATP; Belongs to the Cob(I)alamin adenosyltransferase family. (190 aa) |
| | RPE_4912 | TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; KEGG: rpd:RPD_4412 ATP-dependent DNA helicase RecQ. (617 aa) |
| | rpsT | SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. (88 aa) |
| | RPE_0600 | PFAM: Rubrerythrin; KEGG: rpd:RPD_1530 rubrerythrin. (174 aa) |
| | RPE_0561 | PFAM: DNA methylase N-4/N-6 domain protein; KEGG: eba:ebA2416 adenine specific DNA methylase MOD. (596 aa) |
| | RPE_0560 | PFAM: SNF2-related protein; helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; KEGG: xcb:XC_0536 helicase. (963 aa) |
| | rplU | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (124 aa) |
| | rpmA | PFAM: ribosomal protein L27; KEGG: rpb:RPB_0247 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. (89 aa) |
| | rpmI | PFAM: ribosomal protein L35; KEGG: nha:Nham_0076 ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. (66 aa) |
| | nth | DNA-(apurinic or apyrimidinic site) lyase / endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (264 aa) |
| | ihfB | Integration host factor, beta subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (102 aa) |
| | RPE_0449 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. (565 aa) |
| | hpf | Sigma 54 modulation protein / SSU ribosomal protein S30P; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (196 aa) |
| | RPE_0422 | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; PFAM: ribulose bisphosphate carboxylase, large chain; KEGG: rpc:RPC_0252 ribulose-bisphosphate carboxylase; Belongs to the RuBisCO large chain family. (432 aa) |
| | RPE_0419 | KEGG: rpc:RPC_0256 hypothetical protein. (364 aa) |
| | RPE_0409 | PFAM: peptidase S16, lon domain protein; KEGG: nha:Nham_0082 peptidase S16, lon-like. (224 aa) |
| | RPE_0387 | Chromosome segregation DNA-binding protein; TIGRFAM: parB-like partition proteins; PFAM: ParB domain protein nuclease; KEGG: rpc:RPC_0287 ParB-like partition proteins; Belongs to the ParB family. (300 aa) |
| | dnaQ | DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. (229 aa) |
| | rpsP | PFAM: ribosomal protein S16; KEGG: rpc:RPC_0222 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. (110 aa) |
| | priA | Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (732 aa) |
| | infB | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (893 aa) |
| | rpsO | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. (89 aa) |
| | rpmF | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: bja:bsr0948 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. (60 aa) |
| | RPE_0135 | Hydrogenobyrinic acid a,c-diamide cobaltochelatase; KEGG: rpc:RPC_0538 cobalt chelatase, pCobS small subunit; TIGRFAM: cobalt chelatase, pCobS small subunit; PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase. (331 aa) |
| | RPE_0134 | PFAM: protein of unknown function DUF29; KEGG: rpc:RPC_0539 protein of unknown function DUF29. (164 aa) |
| | RPE_0133 | PFAM: protein of unknown function DUF29; KEGG: rpc:RPC_0539 protein of unknown function DUF29. (166 aa) |
| | rpmB | PFAM: ribosomal protein L28; KEGG: rpc:RPC_0543 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. (101 aa) |
| | RPE_0103 | PFAM: DNA repair protein RadC; KEGG: rpc:RPC_0575 DNA repair protein RadC; Belongs to the UPF0758 family. (238 aa) |
| | recF | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (379 aa) |
| | dnaA | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. (474 aa) |
| | RPE_3093 | KEGG: rpc:RPC_0426 hypothetical protein. (294 aa) |
| | recO | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (258 aa) |
| | RPE_2996 | PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: rpd:RPD_2420 alpha/beta hydrolase fold-3. (315 aa) |
| | RPE_2959 | PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: rpc:RPC_2833 DEAD/DEAH box helicase-like; Belongs to the DEAD box helicase family. (517 aa) |
| | cobB-2 | Silent information regulator protein Sir2; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily. (253 aa) |
| | RPE_2900 | KEGG: rpb:RPB_2725 hypothetical protein. (131 aa) |
| | rpsI | PFAM: ribosomal protein S9; KEGG: rpb:RPB_2672 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (158 aa) |
| | rplM | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (163 aa) |
| | ihfA | Integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family. (113 aa) |
| | RPE_2699 | KEGG: rpc:RPC_2516 hypothetical protein. (124 aa) |
| | cbbM | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type II subfamily. (460 aa) |
| | RPE_2672 | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bja:blr5623 TPR domain protein. (759 aa) |
| | RPE_2671 | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_B1067 TPR repeat protein. (670 aa) |
| | RPE_2586 | PFAM: heat shock protein Hsp20; KEGG: rpc:RPC_2462 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family. (167 aa) |
| | rpsB | PFAM: ribosomal protein S2; KEGG: rpc:RPC_2436 ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. (330 aa) |
| | RPE_2518 | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bja:blr5623 TPR domain protein. (676 aa) |
| | RPE_2517 | PFAM: histone family protein DNA-binding protein; KEGG: rpb:RPB_2570 histone-like DNA-binding protein; Belongs to the bacterial histone-like protein family. (103 aa) |
| | RPE_2360 | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bja:blr5512 hypothetical protein. (186 aa) |
| | RPE_2199 | KEGG: rpc:RPC_3245 hypothetical protein. (289 aa) |
| | RPE_2127 | PFAM: FAD dependent oxidoreductase; KEGG: rpc:RPC_3288 FAD dependent oxidoreductase. (536 aa) |
| | RPE_2119 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (560 aa) |
| | RPE_1988 | KEGG: rpc:RPC_2077 hypothetical protein. (173 aa) |
| | RPE_1967 | PFAM: histone family protein DNA-binding protein; KEGG: bja:blr4404 histone-like protein; Belongs to the bacterial histone-like protein family. (98 aa) |
| | RPE_1938 | PFAM: ferredoxin; KEGG: rpc:RPC_1840 ferredoxin. (302 aa) |
| | RPE_1937 | KEGG: rpc:RPC_1839 hypothetical protein. (162 aa) |
| | RPE_1868 | PFAM: ROSMUCR transcriptional regulator; KEGG: rpc:RPC_1774 transcriptional regulator, MucR family. (138 aa) |
| | RPE_1867 | KEGG: rpc:RPC_1773 hypothetical protein. (316 aa) |
| | RPE_1853 | PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: rpc:RPC_1761 glutathione-dependent formaldehyde-activating, GFA. (154 aa) |
| | eutC | PFAM: Ethanolamine ammonia-lyase light chain; KEGG: rpc:RPC_1713 ethanolamine ammonia-lyase; Belongs to the EutC family. (261 aa) |
| | RPE_1790 | PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rpd:RPD_0706 FAD dependent oxidoreductase. (714 aa) |
| | rpsD | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (222 aa) |
| | RPE_1543 | KEGG: rpc:RPC_1512 tetratricopeptide TPR_2. (1290 aa) |
| | RPE_1524 | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rpb:RPB_3801 TPR repeat protein. (732 aa) |
| | rplY | LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (234 aa) |
| | RPE_1362 | PFAM: ribulose bisphosphate carboxylase, small chain; KEGG: rpc:RPC_1328 ribulose-bisphosphate carboxylase. (141 aa) |
| | cbbL | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. (485 aa) |
| | RPE_1323 | PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rpc:RPC_1289 FAD dependent oxidoreductase. (514 aa) |
| | RPE_1315 | PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rpc:RPC_1261 amine oxidase. (517 aa) |
| | RPE_1257 | KEGG: rpd:RPD_4184 hypothetical protein. (175 aa) |
| | RPE_1104 | KEGG: nwi:Nwi_0542 hypothetical protein. (174 aa) |
| | RPE_1094 | PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: jan:Jann_4236 tetratricopeptide TPR_2. (735 aa) |
| | RPE_1089 | PFAM: lipopolysaccharide biosynthesis; KEGG: ppu:PP3127 exopolysaccharide transport protein, putative. (440 aa) |
| | RPE_1059 | PFAM: N-formylglutamate amidohydrolase; KEGG: rpc:RPC_0966 N-formylglutamate amidohydrolase. (279 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family. (688 aa) |
| | RPE_0858 | PFAM: amine oxidase; KEGG: rpc:RPC_4728 FAD dependent oxidoreductase. (489 aa) |
| | RPE_0836 | KEGG: rpc:RPC_0877 ADP-ribosyl-(dinitrogen reductase) hydrolase; TIGRFAM: ADP-ribosyl-[dinitrogen reductase] hydrolase; PFAM: ADP-ribosylation/Crystallin J1. (294 aa) |
| | RPE_0727 | Methyltransferase type 11; PFAM: Tetratricopeptide TPR_2 repeat protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_0749 tetratricopeptide TPR_2. (308 aa) |
| | rpmE | LSU ribosomal protein L31P; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily. (73 aa) |
| | rpmH | PFAM: ribosomal protein L34; KEGG: rpc:RPC_0819 ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. (44 aa) |
| | RPE_0620 | PFAM: ATPase associated with various cellular activities, AAA_5; CbbQ/NirQ/NorQ C-terminal domain protein; KEGG: rpa:RPA1457 regulatory protein NorQ, probable ATPase. (273 aa) |
| | ackA | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (397 aa) |
