STRINGSTRING
RPE_0613 RPE_0613 RPE_3619 RPE_3619 RPE_3222 RPE_3222 RPE_2385 RPE_2385 RPE_2249 RPE_2249 RPE_2248 RPE_2248 RPE_1213 RPE_1213 RPE_1074 RPE_1074 RPE_0889 RPE_0889 RPE_0672 RPE_0672 RPE_0534 RPE_0534 RPE_0532 RPE_0532 RPE_0120 RPE_0120 RPE_4310 RPE_4310 RPE_0119 RPE_0119 RPE_0073 RPE_0073 RPE_4126 RPE_4126 RPE_4308 RPE_4308 RPE_4356 RPE_4356 RPE_3823 RPE_3823 RPE_3822 RPE_3822 RPE_3776 RPE_3776 RPE_3775 RPE_3775
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPE_0613PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpc:RPC_1034 acyl-CoA dehydrogenase-like. (383 aa)
RPE_3619PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpa:RPA3289 acyl-CoA dehydrogenase. (411 aa)
RPE_3222PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: eba:ebA2055 putative acyl-CoA dehydrogenase. (378 aa)
RPE_2385PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpb:RPB_2120 acyl-CoA dehydrogenase-like. (382 aa)
RPE_2249PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpb:RPB_3266 acyl-CoA dehydrogenase-like. (387 aa)
RPE_2248PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpb:RPB_3267 acyl-CoA dehydrogenase-like. (379 aa)
RPE_1213PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rfr:Rfer_0523 acyl-CoA dehydrogenase-like. (563 aa)
RPE_1074PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpc:RPC_1156 acyl-CoA dehydrogenase-like. (593 aa)
RPE_0889PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpc:RPC_4699 acyl-CoA dehydrogenase-like. (427 aa)
RPE_0672PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rpc:RPC_0737 acyl-CoA dehydrogenase-like. (596 aa)
RPE_0534PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpd:RPD_4383 acyl-CoA dehydrogenase-like. (379 aa)
RPE_0532PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rpb:RPB_4675 acyl-CoA dehydrogenase-like. (398 aa)
RPE_0120PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rpd:RPD_0271 acyl-CoA dehydrogenase-like. (386 aa)
RPE_4310PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpd:RPD_3693 isovaleryl-CoA dehydrogenase. (390 aa)
RPE_0119PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpd:RPD_0270 acyl-CoA dehydrogenase-like. (355 aa)
RPE_0073PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpa:RPA0995 probable acyl-CoA dehydrogenase. (381 aa)
RPE_4126PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpa:RPA1762 putative acyl-CoA dehydrogenase. (424 aa)
RPE_4308PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpa:RPA1612 putative acyl-CoA dehydrogenase. (390 aa)
RPE_4356PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpd:RPD_1264 acyl-CoA dehydrogenase-like. (404 aa)
RPE_3823PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rpc:RPC_2197 acyl-CoA dehydrogenase-like. (375 aa)
RPE_3822PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rpb:RPB_1689 acyl-CoA dehydrogenase-like. (414 aa)
RPE_3776PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rpd:RPD_3550 acyl-CoA dehydrogenase-like. (412 aa)
RPE_3775PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpb:RPB_1750 acyl-CoA dehydrogenase-like. (380 aa)
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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