STRINGSTRING
RPE_0851 RPE_0851 RPE_3525 RPE_3525 RPE_3139 RPE_3139
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPE_0851PFAM: Pyrrolo-quinoline quinone; KEGG: bja:blr6213 methanol dehydrogenase large subunit-like protein. (603 aa)
RPE_3525PFAM: Pyrrolo-quinoline quinone; KEGG: rpb:RPB_2355 pyrrolo-quinoline quinone. (726 aa)
RPE_3139PFAM: Pyrrolo-quinoline quinone; KEGG: rpc:RPC_1907 pyrrolo-quinoline quinone. (624 aa)
Your Current Organism:
Rhodopseudomonas palustris BisA53
NCBI taxonomy Id: 316055
Other names: R. palustris BisA53, Rhodopseudomonas palustris str. BisA53, Rhodopseudomonas palustris strain BisA53
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