(5 nodes) Mixed, incl. Ketone body catabolic process, and Malonate decarboxylase delta subunit network (Rhodopseudomonas palustris BisB18)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

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protein homology

Your Input:
	mdcB	Triphosphoribosyl-dephospho-CoA synthase; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family. (300 aa)
	RPC_1057	Alpha subunit of malonate decarboxylase. (554 aa)
	mdcC	Malonate decarboxylase delta subunit; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism. (104 aa)
	RPC_1059	Beta subunit of malonate decarboxylase. (318 aa)
	RPC_1060	Malonate decarboxylase gamma subunit. (294 aa)

Your Current Organism:

Rhodopseudomonas palustris BisB18

NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RPC_1057	RPC_1059	RPC_1057	RPC_1059	Alpha subunit of malonate decarboxylase.	Beta subunit of malonate decarboxylase.	0.993
RPC_1057	RPC_1060	RPC_1057	RPC_1060	Alpha subunit of malonate decarboxylase.	Malonate decarboxylase gamma subunit.	0.992
RPC_1057	mdcB	RPC_1057	RPC_1054	Alpha subunit of malonate decarboxylase.	Triphosphoribosyl-dephospho-CoA synthase; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.	0.911
RPC_1057	mdcC	RPC_1057	RPC_1058	Alpha subunit of malonate decarboxylase.	Malonate decarboxylase delta subunit; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism.	0.974
RPC_1059	RPC_1057	RPC_1059	RPC_1057	Beta subunit of malonate decarboxylase.	Alpha subunit of malonate decarboxylase.	0.993
RPC_1059	RPC_1060	RPC_1059	RPC_1060	Beta subunit of malonate decarboxylase.	Malonate decarboxylase gamma subunit.	0.996
RPC_1059	mdcB	RPC_1059	RPC_1054	Beta subunit of malonate decarboxylase.	Triphosphoribosyl-dephospho-CoA synthase; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.	0.853
RPC_1059	mdcC	RPC_1059	RPC_1058	Beta subunit of malonate decarboxylase.	Malonate decarboxylase delta subunit; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism.	0.940
RPC_1060	RPC_1057	RPC_1060	RPC_1057	Malonate decarboxylase gamma subunit.	Alpha subunit of malonate decarboxylase.	0.992
RPC_1060	RPC_1059	RPC_1060	RPC_1059	Malonate decarboxylase gamma subunit.	Beta subunit of malonate decarboxylase.	0.996
RPC_1060	mdcB	RPC_1060	RPC_1054	Malonate decarboxylase gamma subunit.	Triphosphoribosyl-dephospho-CoA synthase; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.	0.867
RPC_1060	mdcC	RPC_1060	RPC_1058	Malonate decarboxylase gamma subunit.	Malonate decarboxylase delta subunit; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism.	0.937
mdcB	RPC_1057	RPC_1054	RPC_1057	Triphosphoribosyl-dephospho-CoA synthase; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.	Alpha subunit of malonate decarboxylase.	0.911
mdcB	RPC_1059	RPC_1054	RPC_1059	Triphosphoribosyl-dephospho-CoA synthase; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.	Beta subunit of malonate decarboxylase.	0.853
mdcB	RPC_1060	RPC_1054	RPC_1060	Triphosphoribosyl-dephospho-CoA synthase; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.	Malonate decarboxylase gamma subunit.	0.867
mdcB	mdcC	RPC_1054	RPC_1058	Triphosphoribosyl-dephospho-CoA synthase; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.	Malonate decarboxylase delta subunit; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism.	0.976
mdcC	RPC_1057	RPC_1058	RPC_1057	Malonate decarboxylase delta subunit; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism.	Alpha subunit of malonate decarboxylase.	0.974
mdcC	RPC_1059	RPC_1058	RPC_1059	Malonate decarboxylase delta subunit; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism.	Beta subunit of malonate decarboxylase.	0.940
mdcC	RPC_1060	RPC_1058	RPC_1060	Malonate decarboxylase delta subunit; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism.	Malonate decarboxylase gamma subunit.	0.937
mdcC	mdcB	RPC_1058	RPC_1054	Malonate decarboxylase delta subunit; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism.	Triphosphoribosyl-dephospho-CoA synthase; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.	0.976