STRINGSTRING
RPC_0090 RPC_0090 RPC_0091 RPC_0091 RPC_0092 RPC_0092 RPC_0437 RPC_0437 RPC_0764 RPC_0764 RPC_0924 RPC_0924 RPC_0925 RPC_0925 RPC_0929 RPC_0929 RPC_0930 RPC_0930 RPC_0931 RPC_0931 RPC_0932 RPC_0932 RPC_0933 RPC_0933 RPC_0934 RPC_0934 RPC_1024 RPC_1024 RPC_1153 RPC_1153 RPC_1201 RPC_1201 RPC_1307 RPC_1307 RPC_1391 RPC_1391 RPC_1392 RPC_1392 RPC_1393 RPC_1393 lspA lspA RPC_1441 RPC_1441 RPC_1923 RPC_1923 RPC_2111 RPC_2111 nuoA nuoA nuoB1 nuoB1 nuoC nuoC nuoD nuoD RPC_2406 RPC_2406 RPC_2408 RPC_2408 RPC_2410 RPC_2410 nuoH1 nuoH1 nuoI1 nuoI1 RPC_2413 RPC_2413 nuoK nuoK RPC_2415 RPC_2415 RPC_2416 RPC_2416 nuoN nuoN RPC_3226 RPC_3226 RPC_3730 RPC_3730 RPC_3849 RPC_3849 RPC_3850 RPC_3850 RPC_3852 RPC_3852 RPC_3853 RPC_3853 RPC_3854 RPC_3854 RPC_3855 RPC_3855 RPC_3856 RPC_3856 RPC_3857 RPC_3857 RPC_4040 RPC_4040 nuoN-2 nuoN-2 RPC_4060 RPC_4060 RPC_4061 RPC_4061 nuoK-2 nuoK-2 RPC_4063 RPC_4063 nuoI2 nuoI2 nuoH2 nuoH2 RPC_4066 RPC_4066 RPC_4067 RPC_4067 RPC_4068 RPC_4068 nuoC-2 nuoC-2 nuoB2 nuoB2 nuoA-2 nuoA-2 RPC_4149 RPC_4149 RPC_4419 RPC_4419 RPC_4473 RPC_4473 RPC_4501 RPC_4501 RPC_4502 RPC_4502 RPC_4503 RPC_4503 RPC_4504 RPC_4504 RPC_4505 RPC_4505 RPC_4506 RPC_4506 fdhD fdhD RPC_4565 RPC_4565 RPC_4566 RPC_4566 RPC_4567 RPC_4567 RPC_4568 RPC_4568 RPC_4569 RPC_4569 RPC_4570 RPC_4570 RPC_4571 RPC_4571 RPC_4572 RPC_4572 RPC_4573 RPC_4573 RPC_4574 RPC_4574 RPC_4575 RPC_4575 RPC_4576 RPC_4576 RPC_4577 RPC_4577 RPC_4578 RPC_4578 RPC_4642 RPC_4642 RPC_4643 RPC_4643 fdhD-2 fdhD-2 RPC_4645 RPC_4645 RPC_4646 RPC_4646 RPC_4647 RPC_4647 RPC_4648 RPC_4648 RPC_4787 RPC_4787 RPC_4788 RPC_4788 RPC_4792 RPC_4792 RPC_4796 RPC_4796
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPC_0090Conserved hypothetical protein. (44 aa)
RPC_0091Cytochrome d ubiquinol oxidase, subunit II. (338 aa)
RPC_0092Cytochrome bd ubiquinol oxidase, subunit I. (469 aa)
RPC_0437NAD-dependent epimerase/dehydratase. (349 aa)
RPC_0764Alpha/beta hydrolase fold. (315 aa)
RPC_0924Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (175 aa)
RPC_0925Cytochrome c1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (690 aa)
RPC_0929NADH dehydrogenase (quinone). (687 aa)
RPC_0930Respiratory-chain NADH dehydrogenase, subunit 1. (316 aa)
RPC_0931Conserved hypothetical protein. (220 aa)
RPC_0932NADH dehydrogenase (quinone). (483 aa)
RPC_0933NADH-ubiquinone oxidoreductase, chain 49kDa. (502 aa)
RPC_0934NADH ubiquinone oxidoreductase, 20 kDa subunit. (174 aa)
RPC_10244Fe-4S ferredoxin, iron-sulfur binding. (81 aa)
RPC_1153Conserved hypothetical protein. (151 aa)
RPC_1201Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (771 aa)
RPC_1307Cytochrome c, class I. (147 aa)
RPC_1391Peptidase M16-like. (456 aa)
RPC_1392Peptidase M16-like; Belongs to the peptidase M16 family. (489 aa)
RPC_1393Conserved hypothetical protein. (265 aa)
lspALipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. (190 aa)
RPC_1441Putative diheme cytochrome c-553. (310 aa)
RPC_1923Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (178 aa)
RPC_2111Phosphopantetheine-binding. (94 aa)
nuoANADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (121 aa)
nuoB1NADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (201 aa)
nuoCNADH (or F420H2) dehydrogenase, subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. (199 aa)
nuoDNADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. (396 aa)
RPC_2406NADH-quinone oxidoreductase, E subunit. (265 aa)
RPC_2408NADH-quinone oxidoreductase, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (441 aa)
RPC_2410NADH-quinone oxidoreductase, chain G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (692 aa)
nuoH1Respiratory-chain NADH dehydrogenase, subunit 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. (341 aa)
nuoI1NADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (162 aa)
RPC_2413NADH dehydrogenase (quinone); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (212 aa)
nuoKNADH-ubiquinone oxidoreductase, chain 4L; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (103 aa)
RPC_2415Proton-translocating NADH-quinone oxidoreductase, chain L. (688 aa)
RPC_2416Proton-translocating NADH-quinone oxidoreductase, chain M. (506 aa)
nuoNProton-translocating NADH-quinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (478 aa)
RPC_3226Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (180 aa)
RPC_3730Cytochrome c, class I. (184 aa)
RPC_3849Cytochrome c oxidase, subunit II. (235 aa)
RPC_3850Cytochrome-c oxidase; Belongs to the heme-copper respiratory oxidase family. (840 aa)
RPC_3852Na+/H+ antiporter subunit. (130 aa)
RPC_3853Multiple resistance and pH regulation protein F. (89 aa)
RPC_3854Cation antiporter. (162 aa)
RPC_3855NADH dehydrogenase (quinone). (511 aa)
RPC_3856NADH-ubiquinone oxidoreductase, chain 4L. (123 aa)
RPC_3857NADH dehydrogenase (quinone). (958 aa)
RPC_4040Hypothetical protein. (104 aa)
nuoN-2NADH dehydrogenase (quinone); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (456 aa)
RPC_4060Proton-translocating NADH-quinone oxidoreductase, chain M. (480 aa)
RPC_4061Proton-translocating NADH-quinone oxidoreductase, chain L. (656 aa)
nuoK-2NADH-ubiquinone oxidoreductase, chain 4L; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (102 aa)
RPC_4063NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (155 aa)
nuoI2NADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (171 aa)
nuoH2Respiratory-chain NADH dehydrogenase, subunit 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. (324 aa)
RPC_4066NADH-quinone oxidoreductase, chain G. (871 aa)
RPC_4067NADH dehydrogenase (quinone). (428 aa)
RPC_4068NADH dehydrogenase (ubiquinone), 24 kDa subunit. (157 aa)
nuoC-2NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family. (581 aa)
nuoB2NADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (205 aa)
nuoA-2NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (129 aa)
RPC_4149NAD-dependent epimerase/dehydratase. (297 aa)
RPC_4419Conserved hypothetical protein. (219 aa)
RPC_44734Fe-4S ferredoxin, iron-sulfur binding. (64 aa)
RPC_4501Ech hydrogenase subunit E. (361 aa)
RPC_4502NADH dehydrogenase (ubiquinone), 30 kDa subunit. (171 aa)
RPC_45034Fe-4S ferredoxin, iron-sulfur binding. (166 aa)
RPC_4504NADH ubiquinone oxidoreductase, 20 kDa subunit. (144 aa)
RPC_4505Respiratory-chain NADH dehydrogenase, subunit 1. (319 aa)
RPC_4506NADH dehydrogenase (quinone). (1265 aa)
fdhDFormate dehydrogenase family accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. (277 aa)
RPC_4565Formate/nitrite transporter. (301 aa)
RPC_4566HycI peptidase. Aspartic peptidase. MEROPS family A31. (161 aa)
RPC_4567Processing of large subunit (HycE) of hydrogenase 3. (133 aa)
RPC_4568NADH ubiquinone oxidoreductase, 20 kDa subunit. (246 aa)
RPC_45694Fe-4S ferredoxin, iron-sulfur binding. (189 aa)
RPC_4570NADH dehydrogenase (ubiquinone), 30 kDa subunit. (571 aa)
RPC_4571NADH dehydrogenase (quinone). (512 aa)
RPC_4572NADH-ubiquinone oxidoreductase, chain 4L. (217 aa)
RPC_4573NADH dehydrogenase (quinone). (479 aa)
RPC_4574Respiratory-chain NADH dehydrogenase, subunit 1. (312 aa)
RPC_4575NADH dehydrogenase (quinone). (671 aa)
RPC_45764Fe-4S ferredoxin, iron-sulfur binding. (205 aa)
RPC_45774Fe-4S ferredoxin, iron-sulfur binding. (188 aa)
RPC_4578Formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (723 aa)
RPC_4642Major facilitator superfamily MFS_1. (548 aa)
RPC_4643Formate dehydrogenase delta subunit. (72 aa)
fdhD-2Formate dehydrogenase family accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. (272 aa)
RPC_4645Formate dehydrogenase, alpha subunit. (948 aa)
RPC_4646NADH dehydrogenase (quinone). (518 aa)
RPC_4647NADH dehydrogenase (ubiquinone), 24 kDa subunit. (158 aa)
RPC_4648Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (297 aa)
RPC_4787Cytochrome-c oxidase; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (284 aa)
RPC_4788Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (540 aa)
RPC_4792Cytochrome c oxidase, subunit III. (285 aa)
RPC_4796Peptidase M16-like; Belongs to the peptidase M16 family. (429 aa)
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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