STRINGSTRING
RPC_0084 RPC_0084 RPC_0085 RPC_0085 RPC_0086 RPC_0086 RPC_0087 RPC_0087 RPC_0598 RPC_0598 RPC_1954 RPC_1954 RPC_1955 RPC_1955 RPC_1956 RPC_1956 RPC_1957 RPC_1957 hmuV hmuV RPC_1968 RPC_1968 RPC_1969 RPC_1969 RPC_1970 RPC_1970 RPC_1971 RPC_1971 RPC_1973 RPC_1973 RPC_1974 RPC_1974 RPC_1975 RPC_1975 RPC_1984 RPC_1984 RPC_1985 RPC_1985 RPC_1986 RPC_1986 RPC_1987 RPC_1987 RPC_1988 RPC_1988 RPC_2692 RPC_2692 RPC_3504 RPC_3504 RPC_3505 RPC_3505 RPC_3609 RPC_3609 RPC_3610 RPC_3610 RPC_3611 RPC_3611 RPC_3612 RPC_3612 RPC_3613 RPC_3613 RPC_3614 RPC_3614 RPC_3629 RPC_3629 RPC_3630 RPC_3630 RPC_3631 RPC_3631 RPC_3632 RPC_3632 RPC_3633 RPC_3633 RPC_3947 RPC_3947 RPC_3948 RPC_3948 RPC_4254 RPC_4254 RPC_4255 RPC_4255 RPC_4256 RPC_4256
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPC_0084TonB-dependent receptor, plug. (671 aa)
RPC_0085Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (349 aa)
RPC_0086ABC transporter related. (260 aa)
RPC_0087Periplasmic binding protein. (272 aa)
RPC_0598Pyridoxamine 5'-phosphate oxidase-related, FMN-binding. (247 aa)
RPC_1954Iron permease FTR1. (289 aa)
RPC_1955Putative lipoprotein. (365 aa)
RPC_1956Tat-translocated enzyme; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family. (442 aa)
RPC_1957Protein of unknown function DUF451. (275 aa)
hmuVABC transporter related; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system. (269 aa)
RPC_1968Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (365 aa)
RPC_1969Periplasmic binding protein. (329 aa)
RPC_1970Hypothetical protein. (84 aa)
RPC_1971Coproporphyrinogen III oxidase, anaerobic. (471 aa)
RPC_1973TonB-dependent haem/haemoglobin receptor. (783 aa)
RPC_1974Antibiotic biosynthesis monooxygenase. (112 aa)
RPC_1975Heme utilization protein HuvX. (171 aa)
RPC_1984Protein of unknown function UPF0066. (164 aa)
RPC_1985Periplasmic binding protein. (352 aa)
RPC_1986Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (340 aa)
RPC_1987ABC transporter related. (261 aa)
RPC_1988Conserved hypothetical protein. (177 aa)
RPC_2692Iron permease FTR1. (273 aa)
RPC_3504Conserved hypothetical protein. (111 aa)
RPC_3505Conserved hypothetical membrane antigen. (183 aa)
RPC_3609ABC transporter related. (263 aa)
RPC_3610Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (360 aa)
RPC_3611Periplasmic binding protein. (380 aa)
RPC_3612Putative esterase. (306 aa)
RPC_3613TonB-dependent siderophore receptor. (789 aa)
RPC_3614Transcriptional regulator, AraC family. (296 aa)
RPC_3629Carbohydrate-selective porin OprB. (444 aa)
RPC_3630Conserved hypothetical protein. (474 aa)
RPC_3631Iron permease FTR1. (279 aa)
RPC_3632Conserved hypothetical protein. (126 aa)
RPC_3633Conserved hypothetical membrane antigen. (171 aa)
RPC_3947Extracellular solute-binding protein, family 1. (338 aa)
RPC_3948Binding-protein-dependent transport systems inner membrane component. (559 aa)
RPC_4254Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (329 aa)
RPC_4255ABC transporter related. (260 aa)
RPC_4256Periplasmic binding protein. (288 aa)
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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