(5 nodes) Oligopeptide/dipeptide transporter, C-terminal region, and Nickel cation transmembrane transporter activity network (Rhodopseudomonas palustris BisB18)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPC_2968	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily. (328 aa)
	RPC_2969	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily. (341 aa)
	RPC_2970	Binding-protein-dependent transport systems inner membrane component. (281 aa)
	RPC_2971	Binding-protein-dependent transport systems inner membrane component. (322 aa)
	RPC_2972	Extracellular solute-binding protein, family 5. (535 aa)

Your Current Organism:

Rhodopseudomonas palustris BisB18

NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
RPC_2968	RPC_2969	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	0.828
RPC_2968	RPC_2970	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.996
RPC_2968	RPC_2971	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.984
RPC_2968	RPC_2972	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Extracellular solute-binding protein, family 5.	0.933
RPC_2969	RPC_2968	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	0.828
RPC_2969	RPC_2970	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.997
RPC_2969	RPC_2971	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.986
RPC_2969	RPC_2972	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	Extracellular solute-binding protein, family 5.	0.942
RPC_2970	RPC_2968	Binding-protein-dependent transport systems inner membrane component.	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	0.996
RPC_2970	RPC_2969	Binding-protein-dependent transport systems inner membrane component.	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	0.997
RPC_2970	RPC_2971	Binding-protein-dependent transport systems inner membrane component.	Binding-protein-dependent transport systems inner membrane component.	0.985
RPC_2970	RPC_2972	Binding-protein-dependent transport systems inner membrane component.	Extracellular solute-binding protein, family 5.	0.970
RPC_2971	RPC_2968	Binding-protein-dependent transport systems inner membrane component.	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	0.984
RPC_2971	RPC_2969	Binding-protein-dependent transport systems inner membrane component.	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	0.986
RPC_2971	RPC_2970	Binding-protein-dependent transport systems inner membrane component.	Binding-protein-dependent transport systems inner membrane component.	0.985
RPC_2971	RPC_2972	Binding-protein-dependent transport systems inner membrane component.	Extracellular solute-binding protein, family 5.	0.975
RPC_2972	RPC_2968	Extracellular solute-binding protein, family 5.	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	0.933
RPC_2972	RPC_2969	Extracellular solute-binding protein, family 5.	Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily.	0.942
RPC_2972	RPC_2970	Extracellular solute-binding protein, family 5.	Binding-protein-dependent transport systems inner membrane component.	0.970
RPC_2972	RPC_2971	Extracellular solute-binding protein, family 5.	Binding-protein-dependent transport systems inner membrane component.	0.975