STRINGSTRING
RPC_0172 RPC_0172 RPC_0739 RPC_0739 RPC_0740 RPC_0740 RPC_0794 RPC_0794 RPC_0795 RPC_0795 RPC_1071 RPC_1071 RPC_1901 RPC_1901 RPC_1993 RPC_1993 RPC_2016 RPC_2016 RPC_2058 RPC_2058 RPC_2157 RPC_2157 RPC_2158 RPC_2158 RPC_2200 RPC_2200 azoR azoR RPC_2243 RPC_2243 RPC_2626 RPC_2626 RPC_2886 RPC_2886 RPC_2887 RPC_2887 RPC_3041 RPC_3041 RPC_3096 RPC_3096 RPC_3183 RPC_3183 RPC_3229 RPC_3229 RPC_3230 RPC_3230 RPC_3501 RPC_3501 RPC_4362 RPC_4362 RPC_4364 RPC_4364 RPC_4895 RPC_4895
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPC_0172Transcriptional regulator, AraC family. (263 aa)
RPC_0739O-methyltransferase, family 3. (231 aa)
RPC_0740Transcriptional regulator, AraC family. (279 aa)
RPC_0794Transcriptional regulator, TetR family. (205 aa)
RPC_0795Transcriptional regulator, TetR family. (219 aa)
RPC_1071Transcriptional regulator, GntR family. (274 aa)
RPC_1901Transcriptional regulator, TetR family. (201 aa)
RPC_1993Transcriptional regulator, AraC family. (284 aa)
RPC_2016Transcriptional regulator, AraC family. (375 aa)
RPC_2058L-lysine 2,3-aminomutase. (480 aa)
RPC_2157Cupin 2, conserved barrel. (147 aa)
RPC_2158Hypothetical protein. (78 aa)
RPC_2200Transcriptional regulator, AraC family. (280 aa)
azoR(Acyl-carrier protein) phosphodiesterase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. (202 aa)
RPC_2243Putative transcriptional regulator. (150 aa)
RPC_2626Cupin 2, conserved barrel. (135 aa)
RPC_2886Transcriptional regulator, AraC family with amidase-like domain. (322 aa)
RPC_2887ThiJ/PfpI. (233 aa)
RPC_3041Transcriptional regulator, AraC family. (313 aa)
RPC_3096Transcriptional regulator, TetR family. (213 aa)
RPC_3183Transcriptional regulator, ArsR family. (106 aa)
RPC_3229Transcriptional regulator, AraC family. (268 aa)
RPC_3230Hypothetical protein. (211 aa)
RPC_3501Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (301 aa)
RPC_4362Radical SAM. (387 aa)
RPC_4364Transcriptional regulator, MarR family with acetyltransferase activity. (308 aa)
RPC_4895Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (297 aa)
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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