STRINGSTRING
RPC_4098 RPC_4098 RPC_4752 RPC_4752 RPC_4542 RPC_4542 RPC_4299 RPC_4299 RPC_3613 RPC_3613 RPC_3245 RPC_3245 RPC_2906 RPC_2906 RPC_2858 RPC_2858 RPC_1982 RPC_1982 RPC_1976 RPC_1976 RPC_1405 RPC_1405 RPC_0938 RPC_0938 RPC_0084 RPC_0084
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPC_4098TonB-dependent siderophore receptor. (754 aa)
RPC_4752Putative TolA. (314 aa)
RPC_4542TonB-like. (265 aa)
RPC_4299TonB-dependent receptor. (766 aa)
RPC_3613TonB-dependent siderophore receptor. (789 aa)
RPC_3245Conserved hypothetical protein. (267 aa)
RPC_2906TonB-like. (235 aa)
RPC_2858TonB-dependent siderophore receptor. (756 aa)
RPC_1982TonB-like. (266 aa)
RPC_1976TonB-dependent siderophore receptor. (829 aa)
RPC_1405TonB-dependent receptor. (783 aa)
RPC_0938TonB-like. (286 aa)
RPC_0084TonB-dependent receptor, plug. (671 aa)
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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