STRINGSTRING
RPC_1195 RPC_1195 RPC_1119 RPC_1119 flhA flhA fliQ fliQ fliP fliP flhB flhB RPC_1086 RPC_1086 RPC_0938 RPC_0938 RPC_0937 RPC_0937 yidC yidC secF secF secD secD yajC yajC RPC_2828 RPC_2828 RPC_2906 RPC_2906 RPC_2919 RPC_2919 RPC_2920 RPC_2920 RPC_2921 RPC_2921 RPC_2968 RPC_2968 RPC_2969 RPC_2969 RPC_2991 RPC_2991 RPC_2992 RPC_2992 RPC_2993 RPC_2993 RPC_3001 RPC_3001 tatC tatC tatB tatB tatA tatA RPC_2472 RPC_2472 bamA bamA lolD1 lolD1 RPC_2428 RPC_2428 RPC_2403 RPC_2403 tig tig RPC_1982 RPC_1982 RPC_1981 RPC_1981 RPC_1526 RPC_1526 flhB-2 flhB-2 RPC_1521 RPC_1521 fliQ-2 fliQ-2 RPC_2672 RPC_2672 RPC_0080 RPC_0080 ftsY ftsY ffh ffh secB secB RPC_0299 RPC_0299 secA secA RPC_0652 RPC_0652 RPC_0801 RPC_0801 RPC_3003 RPC_3003 RPC_3004 RPC_3004 RPC_3005 RPC_3005 RPC_3006 RPC_3006 fliP-2 fliP-2 RPC_3007 RPC_3007 RPC_3008 RPC_3008 RPC_3009 RPC_3009 RPC_3010 RPC_3010 RPC_3117 RPC_3117 RPC_3119 RPC_3119 RPC_3245 RPC_3245 RPC_4753 RPC_4753 RPC_4752 RPC_4752 bamD bamD RPC_3399 RPC_3399 secY secY secE secE RPC_3487 RPC_3487 RPC_3532 RPC_3532 RPC_3535 RPC_3535 RPC_3538 RPC_3538 RPC_3548 RPC_3548 RPC_3570 RPC_3570 RPC_3708 RPC_3708 RPC_3713 RPC_3713 RPC_3723 RPC_3723 lolD2 lolD2 RPC_3827 RPC_3827 RPC_3892 RPC_3892 RPC_3895 RPC_3895 RPC_3898 RPC_3898 RPC_3903 RPC_3903 flhA-2 flhA-2 RPC_4232 RPC_4232 RPC_4346 RPC_4346 RPC_4486 RPC_4486 RPC_4511 RPC_4511 RPC_4541 RPC_4541 RPC_4542 RPC_4542 RPC_4543 RPC_4543 RPC_4551 RPC_4551 RPC_4637 RPC_4637 tolB tolB RPC_1215 RPC_1215 RPC_1212 RPC_1212
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPC_1195Sulfate-transporting ATPase; Belongs to the ABC transporter superfamily. (552 aa)
RPC_1119Type III secretion system inner membrane R protein. (248 aa)
flhAFlagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (695 aa)
fliQFlagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (88 aa)
fliPFlagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (248 aa)
flhBFlagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (358 aa)
RPC_1086ATPase FliI/YscN. (443 aa)
RPC_0938TonB-like. (286 aa)
RPC_0937Biopolymer transport protein ExbD/TolR. (145 aa)
yidCProtein translocase subunit yidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. (632 aa)
secFProtein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (334 aa)
secDProtein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (534 aa)
yajCProtein translocase subunit yajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions. (144 aa)
RPC_2828Hypothetical protein. (347 aa)
RPC_2906TonB-like. (235 aa)
RPC_2919Biopolymer transport protein ExbD/TolR. (134 aa)
RPC_2920MotA/TolQ/ExbB proton channel. (680 aa)
RPC_2921Hemolysin activation/secretion protein. (593 aa)
RPC_2968Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily. (328 aa)
RPC_2969Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily. (341 aa)
RPC_2991Biopolymer transport protein ExbD/TolR. (134 aa)
RPC_2992MotA/TolQ/ExbB proton channel. (655 aa)
RPC_2993Hemolysin activation/secretion protein. (590 aa)
RPC_3001Putative general secretion pathway protein M. (185 aa)
tatCSec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. (271 aa)
tatBTwin-arginine translocation protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. (172 aa)
tatATwin-arginine translocation protein, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (78 aa)
RPC_2472Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (128 aa)
bamASurface antigen (D15); Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (841 aa)
lolD1ABC transporter related; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (232 aa)
RPC_2428Lipoprotein releasing system, transmembrane protein, LolC/E family. (426 aa)
RPC_2403S23 ribosomal. (108 aa)
tigTrigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. (453 aa)
RPC_1982TonB-like. (266 aa)
RPC_1981Biopolymer transport protein ExbD/TolR. (157 aa)
RPC_1526Import inner membrane translocase, subunit Tim44. (332 aa)
flhB-2Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (358 aa)
RPC_1521Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (256 aa)
fliQ-2Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (87 aa)
RPC_2672SmpA/OmlA. (161 aa)
RPC_0080ABC transporter related. (217 aa)
ftsYSignal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. (316 aa)
ffhSignal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the i [...] (514 aa)
secBProtein translocase subunit secB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. (164 aa)
RPC_0299Import inner membrane translocase, subunit Tim44. (233 aa)
secAProtein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. (947 aa)
RPC_0652Putative type IV secretory pathway VirD4 components. (602 aa)
RPC_0801Conserved hypothetical protein. (335 aa)
RPC_3003Putative general secretory pathway protein K. (313 aa)
RPC_3004Putative general secretion pathway protein J. (234 aa)
RPC_3005Methylation. (134 aa)
RPC_3006Putative general secretion pathway protein H precursor. (139 aa)
fliP-2Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (254 aa)
RPC_3007General secretion pathway protein G. (155 aa)
RPC_3008Type II secretion system protein. (403 aa)
RPC_3009Type II secretion system protein E. (561 aa)
RPC_3010Type II and III secretion system protein. (774 aa)
RPC_3117Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. (109 aa)
RPC_3119Hypothetical protein. (165 aa)
RPC_3245Conserved hypothetical protein. (267 aa)
RPC_4753Biopolymer transport protein ExbD/TolR. (149 aa)
RPC_4752Putative TolA. (314 aa)
bamDPutative lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (289 aa)
RPC_3399Type III secretion protein; Related to flagellar biosynthesis protein FlhB. (88 aa)
secYProtein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (443 aa)
secEProtein translocase subunit secE/sec61 gamma; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (63 aa)
RPC_3487ABC transporter related; Belongs to the ABC transporter superfamily. (552 aa)
RPC_3532Conjugation TrbI-like protein. (411 aa)
RPC_3535TrbL/VirB6 plasmid conjugal transfer protein. (431 aa)
RPC_3538ATPase. (813 aa)
RPC_3548TRAG protein. (664 aa)
RPC_3570SEC-C metal-binding protein. (179 aa)
RPC_3708Conserved hypothetical protein. (165 aa)
RPC_3713Type II and III secretion system protein; Belongs to the bacterial secretin family. (492 aa)
RPC_3723ABC transporter related; Belongs to the ABC transporter superfamily. (545 aa)
lolD2ABC transporter related; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (225 aa)
RPC_3827Protein of unknown function DUF214. (408 aa)
RPC_3892Conjugation TrbI-like protein. (400 aa)
RPC_3895TrbL/VirB6 plasmid conjugal transfer protein. (390 aa)
RPC_3898ATPase. (813 aa)
RPC_3903TRAG protein. (665 aa)
flhA-2Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (711 aa)
RPC_4232ATPase FliI/YscN. (441 aa)
RPC_4346Conserved hypothetical protein. (365 aa)
RPC_4486Hypothetical protein. (124 aa)
RPC_4511Secretion protein HlyD. (449 aa)
RPC_4541Biopolymer transport protein ExbD/TolR. (142 aa)
RPC_4542TonB-like. (265 aa)
RPC_4543Preprotein translocase subunit SecA (ATPase RNA helicase)-like. (145 aa)
RPC_4551SecC-like protein. (131 aa)
RPC_4637Conserved hypothetical protein. (483 aa)
tolBTwin-arginine translocation pathway signal; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (450 aa)
RPC_1215Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily. (362 aa)
RPC_1212Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily. (341 aa)
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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