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RPC_0945 RPC_0945 RPC_2009 RPC_2009 ntrC ntrC RPC_2580 RPC_2580 RPC_4475 RPC_4475 RPC_3976 RPC_3976 RPC_3757 RPC_3757 RPC_3606 RPC_3606 RPC_0827 RPC_0827 RPC_2722 RPC_2722 RPC_0884 RPC_0884 RPC_1963 RPC_1963
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPC_0945Two component, sigma54 specific, transcriptional regulator, Fis family. (459 aa)
RPC_2009Sigma-54 factor, interaction region. (468 aa)
ntrCNitrogen metabolism transcriptional regulator, NtrC, Fis family; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (480 aa)
RPC_2580Two component, sigma54 specific, transcriptional regulator, Fis family. (456 aa)
RPC_4475Transcriptional regulator, NifA, Fis family. (580 aa)
RPC_3976Two component, sigma54 specific, transcriptional regulator, Fis family. (500 aa)
RPC_3757Two component, sigma54 specific, transcriptional regulator, Fis family. (499 aa)
RPC_3606Sigma54 specific transcriptional regulator with GAF sensor, Fis family. (647 aa)
RPC_0827Two component, sigma54 specific, transcriptional regulator, Fis family. (460 aa)
RPC_2722Sigma-54 factor, interaction region. (628 aa)
RPC_0884Transcriptional regulator, NifA subfamily, Fis family. (539 aa)
RPC_1963Sigma54 specific transcriptional regulator with GAF sensor, Fis family. (647 aa)
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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