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| | RPC_3926 | Superfamily I DNA and RNA helicases and helicase subunits-like. (1190 aa) |
| | dnaA | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. (473 aa) |
| | recF | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (379 aa) |
| | RPC_0064 | Adenylylsulfate kinase / sulfate adenylyltransferase subunit 1. (617 aa) |
| | RPC_0080 | ABC transporter related. (217 aa) |
| | RPC_0086 | ABC transporter related. (260 aa) |
| | aroK | Transcriptional regulator, XRE family with shikimate kinase activity; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. (305 aa) |
| | RPC_0111 | ABC transporter related. (257 aa) |
| | RPC_0113 | ABC transporter related. (242 aa) |
| | RPC_0142 | Phosphoesterase (MutT family)-like. (562 aa) |
| | RPC_0149 | MobA/MobL protein. (1034 aa) |
| | obg | Small GTP-binding protein domain; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. (349 aa) |
| | atpD | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (476 aa) |
| | atpA | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. (510 aa) |
| | priA | Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (734 aa) |
| | RPC_0195 | AFG1-like ATPase. (397 aa) |
| | RPC_0198 | ABC transporter related. (251 aa) |
| | ccmA | Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. (201 aa) |
| | ftsY | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. (316 aa) |
| | ffh | Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the i [...] (514 aa) |
| | RPC_0248 | ABC transporter related. (269 aa) |
| | RPC_0256 | Conserved hypothetical protein. (368 aa) |
| | RPC_0276 | Cell divisionFtsK/SpoIIIE. (815 aa) |
| | RPC_0286 | DNA polymerase III, delta subunit. (342 aa) |
| | RPC_0288 | Chromosome segregation ATPase. (284 aa) |
| | mnmE | tRNA modification GTPase trmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (449 aa) |
| | rho | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (421 aa) |
| | coaE | Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. (199 aa) |
| | hslU | Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. (434 aa) |
| | coaA | Pantothenate kinase. (317 aa) |
| | RPC_0317 | Mg chelatase-related protein. (512 aa) |
| | RPC_0358 | ABC transporter related. (270 aa) |
| | mutS | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. (882 aa) |
| | RPC_0383 | Protein of unknown function UPF0079. (506 aa) |
| | RPC_0386 | DNA helicase/exodeoxyribonuclease V, subunit B. (1042 aa) |
| | RPC_0387 | DNA helicase/exodeoxyribonuclease V, subunit A; Belongs to the helicase family. UvrD subfamily. (1164 aa) |
| | cmk | Cytidylate kinase. (212 aa) |
| | ugpC | ABC transporter related; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (366 aa) |
| | RPC_0416 | ABC transporter related. (317 aa) |
| | RPC_0430 | ABC transporter related. (301 aa) |
| | RPC_0461 | ABC transporter related. (531 aa) |
| | RPC_0469 | PhoH-like protein. (352 aa) |
| | infB | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (880 aa) |
| | secA | Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. (947 aa) |
| | aroK-2 | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. (206 aa) |
| | RPC_0538 | Hydrogenobyrinic acid a,c-diamide cobaltochelatase. (331 aa) |
| | RPC_0545 | Helicase-like. (1169 aa) |
| | metN | ABC transporter related; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (356 aa) |
| | RPC_0571 | ABC transporter related. (271 aa) |
| | lepA | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. (637 aa) |
| | RPC_0595 | Hpr(Ser) kinase/phosphatase. (180 aa) |
| | RPC_0604 | IstB-like ATP-binding protein. (277 aa) |
| | RPC_0643 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. (687 aa) |
| | RPC_0652 | Putative type IV secretory pathway VirD4 components. (602 aa) |
| | RPC_0674 | Lipopolysaccharide biosynthesis. (764 aa) |
| | RPC_0676 | ABC transporter related. (234 aa) |
| | RPC_0677 | ABC transporter related. (260 aa) |
| | modC | Molybdate ABC transporter, ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family. (381 aa) |
| | RPC_0719 | ABC transporter related. (540 aa) |
| | RPC_0747 | DEAD/DEAH box helicase-like. (905 aa) |
| | RPC_0797 | ABC transporter, ATP-binding/permease protein. (632 aa) |
| | engB | GTP-binding; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family. (216 aa) |
| | RPC_0827 | Two component, sigma54 specific, transcriptional regulator, Fis family. (460 aa) |
| | RPC_0834 | Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. (715 aa) |
| | RPC_0839 | ABC transporter related. (246 aa) |
| | RPC_0840 | ABC transporter related. (237 aa) |
| | RPC_0845 | ABC transporter related. (276 aa) |
| | RPC_0857 | ABC transporter related. (251 aa) |
| | RPC_0876 | DEAD/DEAH box helicase-like; Belongs to the DEAD box helicase family. (659 aa) |
| | RPC_0884 | Transcriptional regulator, NifA subfamily, Fis family. (539 aa) |
| | RPC_0916 | ATPase associated with various cellular activities, AAA_3. (334 aa) |
| | RPC_0945 | Two component, sigma54 specific, transcriptional regulator, Fis family. (459 aa) |
| | RPC_0955 | Exodeoxyribonuclease V. (369 aa) |
| | RPC_0994 | MobA/MobL protein. (1034 aa) |
| | RPC_1004 | Hypothetical protein. (567 aa) |
| | RPC_1019 | ABC transporter related; Belongs to the binding-protein-dependent transport system permease family. (594 aa) |
| | RPC_1020 | ABC transporter related. (240 aa) |
| | RPC_1066 | ABC transporter related. (254 aa) |
| | RPC_1079 | Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. (716 aa) |
| | RPC_1086 | ATPase FliI/YscN. (443 aa) |
| | RPC_1184 | ATPase. (1071 aa) |
| | RPC_1186 | Conserved hypothetical protein. (1152 aa) |
| | RPC_1195 | Sulfate-transporting ATPase; Belongs to the ABC transporter superfamily. (552 aa) |
| | RPC_1212 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily. (341 aa) |
| | RPC_1215 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily. (362 aa) |
| | RPC_1250 | Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. (340 aa) |
| | RPC_1251 | Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. (599 aa) |
| | RPC_1270 | ABC transporter related; Belongs to the ABC transporter superfamily. (361 aa) |
| | phnN | Phosphonate metabolism, 1,5-bisphosphokinase (PRPP-forming) PhnN; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP). (192 aa) |
| | RPC_1281 | Phosphonate C-P lyase system, PhnL. (232 aa) |
| | RPC_1282 | Phosphonate C-P lyase system, PhnK. (262 aa) |
| | RPC_1293 | Chlorophyllide reductase iron protein subunit X; Belongs to the NifH/BchL/ChlL family. (331 aa) |
| | bchL | Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. (312 aa) |
| | RPC_1329 | AAA ATPase, central region. (306 aa) |
| | RPC_1362 | ABC transporter related; Belongs to the ABC transporter superfamily. (359 aa) |
| | RPC_1363 | ABC transporter related; Belongs to the ABC transporter superfamily. (367 aa) |
| | RPC_1372 | ABC transporter related. (240 aa) |
| | RPC_1373 | ABC transporter related. (254 aa) |
| | ychF | Conserved hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (365 aa) |
| | RPC_1426 | ABC transporter related. (600 aa) |
| | RPC_1453 | ABC transporter related. (257 aa) |
| | RPC_1564 | Uncharacterized ATPase putative transposase-like. (240 aa) |
| | recA | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (363 aa) |
| | RPC_1619 | ABC transporter related. (244 aa) |
| | RPC_1620 | ABC transporter related. (278 aa) |
| | RPC_1633 | ATPase associated with various cellular activities, AAA_5. (302 aa) |
| | RPC_1661 | ABC transporter related. (234 aa) |
| | RPC_1662 | ABC transporter related. (243 aa) |
| | RPC_1697 | ABC transporter related; Belongs to the binding-protein-dependent transport system permease family. (593 aa) |
| | RPC_1698 | ABC transporter related. (242 aa) |
| | RPC_1731 | Conserved hypothetical protein. (267 aa) |
| | RPC_1754 | LAO/AO transport system ATPase. (331 aa) |
| | RPC_1768 | Protein of unknown function DUF853, NPT hydrolase putative. (522 aa) |
| | RPC_1788 | Hypothetical protein. (132 aa) |
| | RPC_1789 | Hypothetical protein. (581 aa) |
| | RPC_1800 | Protein of unknown function DUF264. (423 aa) |
| | macB | ABC transporter related; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. (655 aa) |
| | cobB | Hydrogenobyrinate a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. (441 aa) |
| | RPC_1890 | Cobalamin (vitamin B12) biosynthesis CobW. (343 aa) |
| | RPC_1911 | ATPase associated with various cellular activities, AAA_3. (356 aa) |
| | RPC_1927 | ABC transporter related. (615 aa) |
| | RPC_1933 | ABC transporter related. (238 aa) |
| | RPC_1947 | ABC transporter related. (256 aa) |
| | RPC_1948 | ABC transporter related. (250 aa) |
| | RPC_1962 | ABC transporter related. (232 aa) |
| | RPC_1963 | Sigma54 specific transcriptional regulator with GAF sensor, Fis family. (647 aa) |
| | hmuV | ABC transporter related; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system. (269 aa) |
| | RPC_1987 | ABC transporter related. (261 aa) |
| | RPC_2007 | Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. (711 aa) |
| | RPC_2009 | Sigma-54 factor, interaction region. (468 aa) |
| | RPC_2036 | ABC transporter related. (544 aa) |
| | RPC_2038 | ABC transporter related. (233 aa) |
| | RPC_2066 | MRP ATP/GTP-binding protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (373 aa) |
| | RPC_2094 | ABC transporter related. (661 aa) |
| | bioD | Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. (209 aa) |
| | RPC_2116 | Protein of unknown function DUF87. (583 aa) |
| | RPC_2122 | ATPase associated with various cellular activities, AAA_5. (280 aa) |
| | RPC_2131 | ABC transporter related. (549 aa) |
| | RPC_2182 | ABC transporter related. (600 aa) |
| | RPC_2220 | Putative ParA family partition protein. (250 aa) |
| | der | Small GTP-binding protein domain; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. (465 aa) |
| | radA | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. (503 aa) |
| | RPC_2290 | Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (498 aa) |
| | gmk | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. (219 aa) |
| | RPC_2317 | ABC transporter related. (627 aa) |
| | RPC_2328 | Regulatory inactivation of DnaA Hda protein; Belongs to the DnaA family. (225 aa) |
| | RPC_2369 | ABC transporter related. (575 aa) |
| | clpX | ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (424 aa) |
| | lon | Lon-A peptidase. Serine peptidase. MEROPS family S16; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (823 aa) |
| | lolD1 | ABC transporter related; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (232 aa) |
| | pyrG | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. (543 aa) |
| | RPC_2526 | GTP-binding protein TypA. (607 aa) |
| | RPC_2552 | ABC transporter related. (245 aa) |
| | ntrC | Nitrogen metabolism transcriptional regulator, NtrC, Fis family; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (480 aa) |
| | RPC_2580 | Two component, sigma54 specific, transcriptional regulator, Fis family. (456 aa) |
| | hflX | GTP-binding protein, HSR1-related; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. (461 aa) |
| | RPC_2608 | ATP-dependent DNA helicase RecG. (699 aa) |
| | mfd | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1172 aa) |
| | era | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. (320 aa) |
| | RPC_2684 | Lipopolysaccharide biosynthesis. (742 aa) |
| | tmk | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. (230 aa) |
| | RPC_2704 | DNA polymerase III, delta prime subunit. (346 aa) |
| | RPC_2722 | Sigma-54 factor, interaction region. (628 aa) |
| | RPC_2745 | UvrD/REP helicase. (687 aa) |
| | uvrA | Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (1001 aa) |
| | RPC_2778 | Protein of unknown function DUF815. (323 aa) |
| | RPC_2833 | DEAD/DEAH box helicase-like; Belongs to the DEAD box helicase family. (503 aa) |
| | RPC_2839 | FeS assembly ATPase SufC. (251 aa) |
| | RPC_2898 | Phosphoribulokinase. (291 aa) |
| | prfC | Bacterial peptide chain release factor 3 (bRF-3); Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. (539 aa) |
| | RPC_2954 | ABC transporter related. (254 aa) |
| | RPC_2955 | ABC transporter related. (251 aa) |
| | RPC_2968 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily. (328 aa) |
| | RPC_2969 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; Belongs to the ABC transporter superfamily. (341 aa) |
| | RPC_2984 | ATP-dependent DNA helicase RecQ. (600 aa) |
| | RPC_3009 | Type II secretion system protein E. (561 aa) |
| | RPC_3016 | ABC transporter related. (237 aa) |
| | RPC_3017 | ABC transporter related. (239 aa) |
| | RPC_3038 | ABC transporter related. (588 aa) |
| | RPC_3042 | ABC transporter related. (611 aa) |
| | RPC_3043 | ABC transporter related. (598 aa) |
| | RPC_3044 | IstB-like ATP-binding protein. (287 aa) |
| | RPC_3053 | DEAD/DEAH box helicase-like. (1173 aa) |
| | RPC_3080 | Conserved hypothetical protein, putative DNA helicase. (1983 aa) |
| | RPC_3086 | ABC transporter related. (609 aa) |
| | RPC_3168 | Conserved hypothetical protein. (224 aa) |
| | RPC_3210 | ABC transporter related. (587 aa) |
| | RPC_3238 | Polyphosphate:AMP phosphotransferase. (328 aa) |
| | RPC_3243 | ABC transporter related. (267 aa) |
| | miaA | tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (285 aa) |
| | RPC_3279 | ATP-dependent DNA helicase, Rep family. (866 aa) |
| | RPC_3283 | ABC transporter related. (306 aa) |
| | RPC_3295 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (561 aa) |
| | RPC_3324 | ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. (802 aa) |
| | RPC_3364 | Cyclic nucleotide-binding domain (cNMP-BD) protein. (772 aa) |
| | RPC_3416 | Recombination protein MgsA. (442 aa) |
| | adk | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (335 aa) |
| | tuf | Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (396 aa) |
| | fusA | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] (690 aa) |
| | RPC_3455 | ABC transporter related. (705 aa) |
| | RPC_3487 | ABC transporter related; Belongs to the ABC transporter superfamily. (552 aa) |
| | RPC_3502 | Cobalamin synthesis protein, P47K. (410 aa) |
| | RPC_3538 | ATPase. (813 aa) |
| | RPC_3541 | Type II secretion system protein E. (322 aa) |
| | RPC_3542 | UvrD/REP helicase. (672 aa) |
| | RPC_3543 | SMC protein-like. (695 aa) |
| | RPC_3548 | TRAG protein. (664 aa) |
| | RPC_3566 | Probably methylase/helicase. (1455 aa) |
| | RPC_3574 | Vesicle-fusing ATPase; Belongs to the AAA ATPase family. (647 aa) |
| | RPC_3577 | ABC transporter related. (930 aa) |
| | RPC_3606 | Sigma54 specific transcriptional regulator with GAF sensor, Fis family. (647 aa) |
| | RPC_3609 | ABC transporter related. (263 aa) |
| | RPC_3647 | ABC transporter related; Belongs to the ABC transporter superfamily. (355 aa) |
| | RPC_3651 | Type III restriction enzyme, res subunit. (1126 aa) |
| | RPC_3674 | Gluconate kinase. (180 aa) |
| | RPC_3698 | ABC transporter related. (231 aa) |
| | RPC_3699 | ABC transporter related. (252 aa) |
| | RPC_3703 | DEAD/DEAH box helicase-like; Belongs to the DEAD box helicase family. (481 aa) |
| | RPC_3715 | Putative pilus assembly protein cpaE. (423 aa) |
| | RPC_3716 | Type II secretion system protein E. (490 aa) |
| | RPC_3723 | ABC transporter related; Belongs to the ABC transporter superfamily. (545 aa) |
| | cobQ | Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (493 aa) |
| | RPC_3746 | cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids. (208 aa) |
| | RPC_3747 | Adenosylcobinamide kinase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. (195 aa) |
| | RPC_3757 | Two component, sigma54 specific, transcriptional regulator, Fis family. (499 aa) |
| | RPC_3761 | Hydrogenase accessory protein HypB. (307 aa) |
| | lolD2 | ABC transporter related; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (225 aa) |
| | RPC_3840 | Cobyrinic acid a,c-diamide synthase. (226 aa) |
| | phnC1 | Phosphonate ABC transporter PhnC, ATP-binding; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. (272 aa) |
| | RPC_3877 | Hypothetical protein. (382 aa) |
| | RPC_3898 | ATPase. (813 aa) |
| | RPC_3901 | Type II secretion system protein E. (322 aa) |
| | RPC_3903 | TRAG protein. (665 aa) |
| | RPC_3919 | Probably methylase/helicase. (1459 aa) |
| | RPC_3932 | Hypothetical protein. (893 aa) |
| | RPC_3936 | Helicase-like. (1079 aa) |
| | RPC_3938 | Superfamily I DNA and RNA helicases and helicase subunits-like. (1651 aa) |
| | potA | Spermidine/putrescine ABC transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (381 aa) |
| | RPC_3976 | Two component, sigma54 specific, transcriptional regulator, Fis family. (500 aa) |
| | cysA | Sulphate transport system permease protein 1; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (349 aa) |
| | cysC | Sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. (639 aa) |
| | ureG | Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. (207 aa) |
| | RPC_4042 | ABC transporter related. (258 aa) |
| | RPC_4047 | Conserved hypothetical protein. (526 aa) |
| | ndvA | ABC transporter related; Involved in beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation (By similarity). (604 aa) |
| | purA | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (430 aa) |
| | RPC_4119 | Small GTP-binding protein domain. (682 aa) |
| | uvrB | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (1053 aa) |
| | RPC_4170 | ABC transporter related. (253 aa) |
| | RPC_4171 | ABC transporter related. (231 aa) |
| | RPC_4175 | ABC transporter related. (276 aa) |
| | RPC_4180 | ABC transporter related. (279 aa) |
| | RPC_4190 | ABC transporter related. (246 aa) |
| | RPC_4223 | Hypothetical protein. (417 aa) |
| | RPC_4229 | Conserved hypothetical protein. (722 aa) |
| | RPC_4232 | ATPase FliI/YscN. (441 aa) |
| | RPC_4255 | ABC transporter related. (260 aa) |
| | cobQ-2 | Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (524 aa) |
| | clpB | ATPase AAA-2; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. (879 aa) |
| | smc | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1154 aa) |
| | RPC_4378 | Conserved hypothetical protein. (262 aa) |
| | RPC_4379 | Conserved hypothetical protein. (219 aa) |
| | phnC2 | Phosphonate ABC transporter PhnC, ATP-binding; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. (271 aa) |
| | nifH | Nitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family. (300 aa) |
| | RPC_4475 | Transcriptional regulator, NifA, Fis family. (580 aa) |
| | RPC_4480 | Adenylate/guanylate cyclase. (1037 aa) |
| | RPC_4482 | ATPase. (502 aa) |
| | RPC_4493 | Hydrogenase accessory protein HypB. (300 aa) |
| | RPC_4497 | Cobyrinic acid a,c-diamide synthase. (268 aa) |
| | RPC_4512 | ABC transporter related. (745 aa) |
| | RPC_4513 | ABC transporter related. (562 aa) |
| | RPC_4520 | MobA/MobL protein. (998 aa) |
| | RPC_4534 | ABC transporter related. (263 aa) |
| | RPC_4543 | Preprotein translocase subunit SecA (ATPase RNA helicase)-like. (145 aa) |
| | RPC_4547 | Osmosensitive K+ channel signal transduction histidine kinase. (907 aa) |
| | RPC_4559 | Hydrogenase accessory protein HypB. (301 aa) |
| | RPC_4664 | ABC transporter related. (927 aa) |
| | nifH-2 | Nitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family. (275 aa) |
| | lpxK | lipid-A-disaccharide synthase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). (343 aa) |
| | RPC_4731 | ABC transporter-like. (579 aa) |
| | RPC_4741 | Cobyrinic acid a,c-diamide synthase. (298 aa) |
| | ftsH | Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (638 aa) |
| | ruvB | Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (349 aa) |
| | RPC_4828 | ABC transporter related. (252 aa) |
| | RPC_4831 | Cobalamin synthesis protein, P47K. (350 aa) |
| | dnaX | DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (618 aa) |
| | RPC_4854 | ATP-dependent helicase HrpB. (877 aa) |
| | ftsE | ABC transporter related; Part of the ABC transporter FtsEX involved in cellular division. (219 aa) |
| | RPC_4896 | Hypothetical protein. (441 aa) |
| | pstB | Phosphate transport system permease protein 1; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (275 aa) |
