STRINGSTRING
RPC_4400 RPC_4400 RPC_0570 RPC_0570 RPC_0844 RPC_0844 RPC_0855 RPC_0855 RPC_1931 RPC_1931 RPC_2525 RPC_2525 RPC_4536 RPC_4536
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPC_4400TRAP transporter solute receptor, TAXI family. (315 aa)
RPC_0570ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like. (339 aa)
RPC_0844ABC transporter substrate-binding protein. (345 aa)
RPC_0855Twin-arginine translocation pathway signal. (326 aa)
RPC_1931ABC sulfate transport system, periplasmic binding protein. (330 aa)
RPC_2525TRAP transporter solute receptor, TAXI family. (486 aa)
RPC_4536NLPA lipoprotein. (373 aa)
Your Current Organism:
Rhodopseudomonas palustris BisB18
NCBI taxonomy Id: 316056
Other names: R. palustris BisB18, Rhodopseudomonas palustris str. BisB18, Rhodopseudomonas palustris strain BisB18
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