(50 nodes) Histidine kinase domain, and Signal transduction response regulator, C-terminal effector network (Rhodopseudomonas palustris BisB5)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPD_0067	ATP-binding region, ATPase-like. (495 aa)
	RPD_0119	Sensor histidine kinase with PAS/PAC. (909 aa)
	RPD_0207	PAS/PAC sensor signal transduction histidine kinase. (837 aa)
	RPD_0225	Methyl-accepting chemotaxis protein. (560 aa)
	RPD_0284	PAS/PAC sensor hybrid histidine kinase. (1105 aa)
	RPD_0407	Multi-sensor hybrid histidine kinase. (650 aa)
	RPD_0440	Two component transcriptional regulator, winged helix family. (228 aa)
	RPD_0837	ATP-binding region, ATPase-like. (1168 aa)
	RPD_0926	Histidine kinase. (403 aa)
	RPD_0941	Response regulator receiver. (125 aa)
	RPD_1341	Response regulator receiver. (131 aa)
	RPD_1342	Two component transcriptional regulator, LuxR family. (205 aa)
	RPD_1343	PAS/PAC sensor signal transduction histidine kinase. (510 aa)
	RPD_1447	PAS/PAC sensor signal transduction histidine kinase. (1201 aa)
	RPD_1497	Hpt sensor hybrid histidine kinase. (880 aa)
	RPD_1499	Two component transcriptional regulator, LuxR family. (209 aa)
	RPD_1700	Cell cycle control histidine kinase CckA. (850 aa)
	RPD_1867	Chemotaxis sensory transducer. (714 aa)
	RPD_1944	Multi-sensor signal transduction histidine kinase. (607 aa)
	RPD_2018	ATP-binding region, ATPase-like. (771 aa)
	RPD_2046	ATP-binding region, ATPase-like. (530 aa)
	RPD_2129	ATP-binding region, ATPase-like. (135 aa)
	RPD_2196	ATP-binding region, ATPase-like. (705 aa)
	RPD_2347	ATP-binding region, ATPase-like. (471 aa)
	RPD_2401	Two component transcriptional regulator, LuxR family. (230 aa)
	RPD_2402	Multi-sensor signal transduction histidine kinase. (762 aa)
	RPD_2403	Phytochrome sensor signal transduction histidine kinase. (776 aa)
	RPD_2404	Response regulator receiver protein. (154 aa)
	RPD_2405	ATP-binding region, ATPase-like. (376 aa)
	RPD_2428	Signal transduction histidine kinase. (360 aa)
	RPD_2429	Response regulator receiver. (147 aa)
	RPD_2430	Multi-sensor signal transduction histidine kinase. (510 aa)
	RPD_2513	Hpt sensor hybrid histidine kinase. (945 aa)
	RPD_2514	Response regulator receiver. (232 aa)
	RPD_3038	Response regulator receiver modulated diguanylate cyclase. (457 aa)
	RPD_3039	Response regulator receiver. (121 aa)
	RPD_3087	ATP-binding region, ATPase-like. (847 aa)
	RPD_3109	Multi-sensor signal transduction histidine kinase. (901 aa)
	RPD_3277	PAS/PAC sensor hybrid histidine kinase. (812 aa)
	RPD_3672	Cell cycle transcriptional regulator CtrA. (233 aa)
	RPD_3679	Conserved hypothetical protein. (217 aa)
	RPD_3788	Phytochrome. (772 aa)
	RPD_3789	Two component transcriptional regulator, LuxR family. (228 aa)
	RPD_3865	ATP-binding region, ATPase-like. (1122 aa)
	RPD_3866	Two component transcriptional regulator, LuxR family. (309 aa)
	RPD_4076	Hpt sensor hybrid histidine kinase. (876 aa)
	RPD_4356	Response regulator receiver. (119 aa)
	RPD_4374	ATP-binding region, ATPase-like. (690 aa)
	RPD_4375	Response regulator receiver sensor signal transduction histidine kinase. (550 aa)
	RPD_4376	Two component transcriptional regulator, winged helix family. (247 aa)

Your Current Organism:

Rhodopseudomonas palustris BisB5

NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
RPD_0067	RPD_0207	ATP-binding region, ATPase-like.	PAS/PAC sensor signal transduction histidine kinase.	0.604
RPD_0067	RPD_0407	ATP-binding region, ATPase-like.	Multi-sensor hybrid histidine kinase.	0.425
RPD_0067	RPD_0440	ATP-binding region, ATPase-like.	Two component transcriptional regulator, winged helix family.	0.892
RPD_0067	RPD_0926	ATP-binding region, ATPase-like.	Histidine kinase.	0.442
RPD_0067	RPD_1497	ATP-binding region, ATPase-like.	Hpt sensor hybrid histidine kinase.	0.690
RPD_0067	RPD_1944	ATP-binding region, ATPase-like.	Multi-sensor signal transduction histidine kinase.	0.519
RPD_0067	RPD_2018	ATP-binding region, ATPase-like.	ATP-binding region, ATPase-like.	0.528
RPD_0067	RPD_2428	ATP-binding region, ATPase-like.	Signal transduction histidine kinase.	0.522
RPD_0067	RPD_2430	ATP-binding region, ATPase-like.	Multi-sensor signal transduction histidine kinase.	0.446
RPD_0067	RPD_2514	ATP-binding region, ATPase-like.	Response regulator receiver.	0.474
RPD_0067	RPD_3038	ATP-binding region, ATPase-like.	Response regulator receiver modulated diguanylate cyclase.	0.514
RPD_0067	RPD_3039	ATP-binding region, ATPase-like.	Response regulator receiver.	0.523
RPD_0067	RPD_3672	ATP-binding region, ATPase-like.	Cell cycle transcriptional regulator CtrA.	0.555
RPD_0067	RPD_3866	ATP-binding region, ATPase-like.	Two component transcriptional regulator, LuxR family.	0.655
RPD_0067	RPD_4076	ATP-binding region, ATPase-like.	Hpt sensor hybrid histidine kinase.	0.894
RPD_0067	RPD_4376	ATP-binding region, ATPase-like.	Two component transcriptional regulator, winged helix family.	0.473
RPD_0119	RPD_0207	Sensor histidine kinase with PAS/PAC.	PAS/PAC sensor signal transduction histidine kinase.	0.884
RPD_0119	RPD_0225	Sensor histidine kinase with PAS/PAC.	Methyl-accepting chemotaxis protein.	0.898
RPD_0119	RPD_0284	Sensor histidine kinase with PAS/PAC.	PAS/PAC sensor hybrid histidine kinase.	0.962
RPD_0119	RPD_0407	Sensor histidine kinase with PAS/PAC.	Multi-sensor hybrid histidine kinase.	0.959