STRINGSTRING
RPD_0207 RPD_0207 RPD_0941 RPD_0941 RPD_3672 RPD_3672 RPD_3679 RPD_3679 RPD_4356 RPD_4356
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPD_0207PAS/PAC sensor signal transduction histidine kinase. (837 aa)
RPD_0941Response regulator receiver. (125 aa)
RPD_3672Cell cycle transcriptional regulator CtrA. (233 aa)
RPD_3679Conserved hypothetical protein. (217 aa)
RPD_4356Response regulator receiver. (119 aa)
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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