STRINGSTRING
cheB cheB RPD_4403 RPD_4403 RPD_4375 RPD_4375 RPD_4374 RPD_4374 RPD_4347 RPD_4347 RPD_4339 RPD_4339 RPD_4242 RPD_4242 RPD_4208 RPD_4208 RPD_4195 RPD_4195 RPD_4076 RPD_4076 RPD_3883 RPD_3883 RPD_3865 RPD_3865 RPD_3836 RPD_3836 RPD_3788 RPD_3788 RPD_3772 RPD_3772 RPD_3740 RPD_3740 RPD_3714 RPD_3714 RPD_3679 RPD_3679 RPD_3678 RPD_3678 RPD_3674 RPD_3674 RPD_3635 RPD_3635 RPD_3631 RPD_3631 RPD_3582 RPD_3582 RPD_3464 RPD_3464 RPD_3429 RPD_3429 prmA prmA RPD_3337 RPD_3337 RPD_3312 RPD_3312 RPD_3277 RPD_3277 RPD_3264 RPD_3264 RPD_3087 RPD_3087 lipB lipB RPD_3054 RPD_3054 RPD_3011 RPD_3011 selO selO pcm pcm RPD_2697 RPD_2697 bpt bpt acpS acpS rimO rimO glmS glmS RPD_2601 RPD_2601 RPD_2599 RPD_2599 RPD_2591 RPD_2591 RPD_2589 RPD_2589 lipA lipA RPD_2576 RPD_2576 RPD_2553 RPD_2553 cobB-2 cobB-2 RPD_2513 RPD_2513 RPD_2505 RPD_2505 RPD_2403 RPD_2403 RPD_2402 RPD_2402 RPD_2377 RPD_2377 RPD_2347 RPD_2347 RPD_2316 RPD_2316 RPD_2284 RPD_2284 RPD_2283 RPD_2283 RPD_2196 RPD_2196 RPD_2129 RPD_2129 RPD_2046 RPD_2046 RPD_2018 RPD_2018 RPD_2013 RPD_2013 ccmE ccmE RPD_1998 RPD_1998 RPD_1966 RPD_1966 RPD_1897 RPD_1897 RPD_1801 RPD_1801 RPD_1789 RPD_1789 gcvH gcvH RPD_1714 RPD_1714 RPD_1700 RPD_1700 RPD_1664 RPD_1664 RPD_1559 RPD_1559 RPD_1497 RPD_1497 RPD_1494 RPD_1494 RPD_1490 RPD_1490 RPD_1447 RPD_1447 RPD_1351 RPD_1351 RPD_1343 RPD_1343 RPD_1277 RPD_1277 RPD_1245 RPD_1245 RPD_1209 RPD_1209 RPD_1180 RPD_1180 RPD_1178 RPD_1178 RPD_1175 RPD_1175 RPD_1169 RPD_1169 RPD_1031 RPD_1031 RPD_0887 RPD_0887 RPD_0837 RPD_0837 RPD_0824 RPD_0824 RPD_0801 RPD_0801 RPD_0743 RPD_0743 RPD_0665 RPD_0665 RPD_0600 RPD_0600 RPD_0591 RPD_0591 RPD_0437 RPD_0437 RPD_0426 RPD_0426 RPD_0407 RPD_0407 RPD_0372 RPD_0372 RPD_0369 RPD_0369 RPD_0368 RPD_0368 RPD_0308 RPD_0308 RPD_0284 RPD_0284 RPD_0245 RPD_0245 RPD_0207 RPD_0207 map map RPD_0130 RPD_0130 RPD_0119 RPD_0119 RPD_0118 RPD_0118 prmC prmC RPD_0067 RPD_0067 RPD_0010 RPD_0010
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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cheBResponse regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (385 aa)
RPD_4403ATP-binding region, ATPase-like. (454 aa)
RPD_4375Response regulator receiver sensor signal transduction histidine kinase. (550 aa)
RPD_4374ATP-binding region, ATPase-like. (690 aa)
RPD_4347GGDEF domain. (958 aa)
RPD_4339GCN5-related N-acetyltransferase. (147 aa)
RPD_4242ATP-binding region, ATPase-like. (463 aa)
RPD_4208LemA. (183 aa)
RPD_4195Conserved hypothetical protein. (328 aa)
RPD_4076Hpt sensor hybrid histidine kinase. (876 aa)
RPD_3883ATP-binding region, ATPase-like. (462 aa)
RPD_3865ATP-binding region, ATPase-like. (1122 aa)
RPD_3836Cache, type 2. (661 aa)
RPD_3788Phytochrome. (772 aa)
RPD_3772Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. (330 aa)
RPD_3740Phytochrome. (732 aa)
RPD_3714LemA. (204 aa)
RPD_3679Conserved hypothetical protein. (217 aa)
RPD_3678ATP-binding region, ATPase-like. (925 aa)
RPD_3674MCP methyltransferase, CheR-type. (292 aa)
RPD_3635Protein of unknown function DUF159; Belongs to the SOS response-associated peptidase family. (241 aa)
RPD_3631Conserved hypothetical protein, interruption-N. (507 aa)
RPD_3582Cache, type 2. (151 aa)
RPD_3464GCN5-related N-acetyltransferase. (204 aa)
RPD_3429Thiamine biosynthesis protein ThiS. (63 aa)
prmALSU ribosomal protein L11P methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. (295 aa)
RPD_3337Sensory box histidine kinase/response regulator. (709 aa)
RPD_3312CoA-binding. (697 aa)
RPD_3277PAS/PAC sensor hybrid histidine kinase. (812 aa)
RPD_3264Signal transduction histidine kinase. (261 aa)
RPD_3087ATP-binding region, ATPase-like. (847 aa)
lipBLipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. (255 aa)
RPD_30544-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family-like. (644 aa)
RPD_3011Hypothetical protein. (148 aa)
selOProtein of unknown function UPF0061; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). (492 aa)
pcmprotein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. (217 aa)
RPD_2697Lipopolysaccharide biosynthesis. (769 aa)
bptArginyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. (257 aa)
acpSHolo-(acyl-carrier-protein) synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family. (139 aa)
rimOConserved hypothetical protein; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. (441 aa)
glmSGlutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (608 aa)
RPD_2601Peptidyl-prolyl cis-trans isomerase, cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (155 aa)
RPD_2599Peptidyl-prolyl cis-trans isomerase, cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (187 aa)
RPD_2591Multi-sensor signal transduction histidine kinase. (762 aa)
RPD_2589Signal transduction histidine kinase, nitrogen specific, NtrB. (390 aa)
lipALipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (319 aa)
RPD_2576protein-L-isoaspartate(D-aspartate) O-methyltransferase. (221 aa)
RPD_2553Glycosyl transferase, family 39. (580 aa)
cobB-2Silent information regulator protein Sir2; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily. (253 aa)
RPD_2513Hpt sensor hybrid histidine kinase. (945 aa)
RPD_2505Lysine--tRNA ligase. (351 aa)
RPD_2403Phytochrome sensor signal transduction histidine kinase. (776 aa)
RPD_2402Multi-sensor signal transduction histidine kinase. (762 aa)
RPD_2377ATP-binding region, ATPase-like. (759 aa)
RPD_2347ATP-binding region, ATPase-like. (471 aa)
RPD_2316precorrin-6Y C5,15-methyltransferase (decarboxylating). (369 aa)
RPD_2284Protein of unknown function DUF159; Belongs to the SOS response-associated peptidase family. (196 aa)
RPD_2283Protein of unknown function DUF159. (168 aa)
RPD_2196ATP-binding region, ATPase-like. (705 aa)
RPD_2129ATP-binding region, ATPase-like. (135 aa)
RPD_2046ATP-binding region, ATPase-like. (530 aa)
RPD_2018ATP-binding region, ATPase-like. (771 aa)
RPD_2013ATP-binding region, ATPase-like. (490 aa)
ccmECcmE/CycJ protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. (164 aa)
RPD_1998ATP-binding region, ATPase-like. (465 aa)
RPD_1966Phage portal protein, HK97. (391 aa)
RPD_1897Hydroxypyruvate reductase. (438 aa)
RPD_1801Glycosyl transferase, family 39. (497 aa)
RPD_1789Conserved hypothetical protein. (125 aa)
gcvHGlycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (121 aa)
RPD_1714Nuclear protein SET. (300 aa)
RPD_1700Cell cycle control histidine kinase CckA. (850 aa)
RPD_1664Conserved hypothetical protein. (503 aa)
RPD_1559ATP-binding region, ATPase-like. (469 aa)
RPD_1497Hpt sensor hybrid histidine kinase. (880 aa)
RPD_1494MCP methyltransferase, CheR-type. (292 aa)
RPD_1490Serine/threonine protein kinase. (479 aa)
RPD_1447PAS/PAC sensor signal transduction histidine kinase. (1201 aa)
RPD_1351GCN5-related N-acetyltransferase. (907 aa)
RPD_1343PAS/PAC sensor signal transduction histidine kinase. (510 aa)
RPD_1277Modification methylase, HemK family; Belongs to the protein N5-glutamine methyltransferase family. (330 aa)
RPD_1245Protein of unknown function DUF159; Belongs to the SOS response-associated peptidase family. (259 aa)
RPD_1209Hypothetical protein. (528 aa)
RPD_1180PAS/PAC sensor signal transduction histidine kinase. (451 aa)
RPD_1178Hydrogenase expression/formation protein HypE. (348 aa)
RPD_1175(NiFe) hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. (763 aa)
RPD_1169HupH hydrogenase expression protein. (288 aa)
RPD_1031CoA-binding. (699 aa)
RPD_0887Histidine kinase. (451 aa)
RPD_0837ATP-binding region, ATPase-like. (1168 aa)
RPD_0824GCN5-related N-acetyltransferase. (195 aa)
RPD_0801Sel1. (1134 aa)
RPD_0743HWE histidine kinase. (483 aa)
RPD_0665Osmosensitive K+ channel His kinase sensor. (907 aa)
RPD_0600ATP-binding region, ATPase-like. (449 aa)
RPD_0591DNA helicase, putative. (1629 aa)
RPD_0437Diguanylate cyclase. (558 aa)
RPD_0426Protein of unknown function DUF299; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation. (279 aa)
RPD_0407Multi-sensor hybrid histidine kinase. (650 aa)
RPD_0372Conserved hypothetical protein. (513 aa)
RPD_0369Hpr(Ser) kinase/phosphatase. (153 aa)
RPD_0368Signal transduction histidine kinase. (563 aa)
RPD_0308Diguanylate cyclase/phosphodiesterase. (583 aa)
RPD_0284PAS/PAC sensor hybrid histidine kinase. (1105 aa)
RPD_0245Ribosomal-protein-alanine acetyltransferase. (161 aa)
RPD_0207PAS/PAC sensor signal transduction histidine kinase. (837 aa)
mapMethionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. (274 aa)
RPD_0130ATP-binding region, ATPase-like. (440 aa)
RPD_0119Sensor histidine kinase with PAS/PAC. (909 aa)
RPD_0118HWE histidine kinase. (538 aa)
prmCModification methylase, HemK family; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. (292 aa)
RPD_0067ATP-binding region, ATPase-like. (495 aa)
RPD_0010Protein of unknown function DUF159; Belongs to the SOS response-associated peptidase family. (230 aa)
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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