STRINGSTRING
ntrC ntrC RPD_2592 RPD_2592 RPD_3741 RPD_3741 RPD_0601 RPD_0601 RPD_1061 RPD_1061 RPD_3748 RPD_3748 RPD_3842 RPD_3842 RPD_1408 RPD_1408 RPD_1179 RPD_1179
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ntrCNitrogen metabolism transcriptional regulator, NtrC, Fis family; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (480 aa)
RPD_2592Two component, sigma54 specific, transcriptional regulator, Fis family. (455 aa)
RPD_3741Transcriptional regulator PpsR. (440 aa)
RPD_0601Response regulator receiver. (177 aa)
RPD_1061Transcriptional regulator, NifA, Fis family. (582 aa)
RPD_3748Transcriptional regulator, Fis family / DNA-binding protein Fis. (477 aa)
RPD_3842Two component, sigma54 specific, transcriptional regulator, Fis family. (459 aa)
RPD_1408Two component, sigma54 specific, transcriptional regulator, Fis family. (500 aa)
RPD_1179Two component, sigma54 specific, transcriptional regulator, Fis family. (482 aa)
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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