STRINGSTRING
RPD_0067 RPD_0067 RPD_4403 RPD_4403 htpG htpG RPD_4375 RPD_4375 RPD_4374 RPD_4374 RPD_4242 RPD_4242 RPD_4076 RPD_4076 mutL mutL RPD_3883 RPD_3883 RPD_3865 RPD_3865 RPD_3788 RPD_3788 RPD_3679 RPD_3679 RPD_3678 RPD_3678 RPD_3368 RPD_3368 RPD_3337 RPD_3337 RPD_3277 RPD_3277 RPD_3264 RPD_3264 RPD_3109 RPD_3109 RPD_3087 RPD_3087 RPD_3015 RPD_3015 RPD_2591 RPD_2591 RPD_2589 RPD_2589 RPD_2513 RPD_2513 parE parE RPD_2430 RPD_2430 RPD_2428 RPD_2428 RPD_2405 RPD_2405 RPD_2403 RPD_2403 RPD_2402 RPD_2402 RPD_2377 RPD_2377 RPD_2347 RPD_2347 RPD_2196 RPD_2196 RPD_2129 RPD_2129 RPD_2046 RPD_2046 RPD_2018 RPD_2018 RPD_2013 RPD_2013 RPD_1998 RPD_1998 RPD_1944 RPD_1944 RPD_1872 RPD_1872 RPD_1700 RPD_1700 RPD_1666 RPD_1666 RPD_1559 RPD_1559 RPD_1497 RPD_1497 RPD_1447 RPD_1447 RPD_1343 RPD_1343 RPD_1180 RPD_1180 RPD_0926 RPD_0926 RPD_0887 RPD_0887 RPD_0837 RPD_0837 RPD_0743 RPD_0743 RPD_0665 RPD_0665 RPD_0600 RPD_0600 RPD_0407 RPD_0407 RPD_0368 RPD_0368 RPD_0327 RPD_0327 RPD_0284 RPD_0284 RPD_0207 RPD_0207 RPD_0130 RPD_0130 RPD_0119 RPD_0119 RPD_0118 RPD_0118 gyrB gyrB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPD_0067ATP-binding region, ATPase-like. (495 aa)
RPD_4403ATP-binding region, ATPase-like. (454 aa)
htpGHeat shock protein Hsp90; Molecular chaperone. Has ATPase activity. (628 aa)
RPD_4375Response regulator receiver sensor signal transduction histidine kinase. (550 aa)
RPD_4374ATP-binding region, ATPase-like. (690 aa)
RPD_4242ATP-binding region, ATPase-like. (463 aa)
RPD_4076Hpt sensor hybrid histidine kinase. (876 aa)
mutLDNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (597 aa)
RPD_3883ATP-binding region, ATPase-like. (462 aa)
RPD_3865ATP-binding region, ATPase-like. (1122 aa)
RPD_3788Phytochrome. (772 aa)
RPD_3679Conserved hypothetical protein. (217 aa)
RPD_3678ATP-binding region, ATPase-like. (925 aa)
RPD_3368ATP-binding region, ATPase-like. (833 aa)
RPD_3337Sensory box histidine kinase/response regulator. (709 aa)
RPD_3277PAS/PAC sensor hybrid histidine kinase. (812 aa)
RPD_3264Signal transduction histidine kinase. (261 aa)
RPD_3109Multi-sensor signal transduction histidine kinase. (901 aa)
RPD_3087ATP-binding region, ATPase-like. (847 aa)
RPD_3015Signal transduction histidine kinase. (366 aa)
RPD_2591Multi-sensor signal transduction histidine kinase. (762 aa)
RPD_2589Signal transduction histidine kinase, nitrogen specific, NtrB. (390 aa)
RPD_2513Hpt sensor hybrid histidine kinase. (945 aa)
parEDNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (684 aa)
RPD_2430Multi-sensor signal transduction histidine kinase. (510 aa)
RPD_2428Signal transduction histidine kinase. (360 aa)
RPD_2405ATP-binding region, ATPase-like. (376 aa)
RPD_2403Phytochrome sensor signal transduction histidine kinase. (776 aa)
RPD_2402Multi-sensor signal transduction histidine kinase. (762 aa)
RPD_2377ATP-binding region, ATPase-like. (759 aa)
RPD_2347ATP-binding region, ATPase-like. (471 aa)
RPD_2196ATP-binding region, ATPase-like. (705 aa)
RPD_2129ATP-binding region, ATPase-like. (135 aa)
RPD_2046ATP-binding region, ATPase-like. (530 aa)
RPD_2018ATP-binding region, ATPase-like. (771 aa)
RPD_2013ATP-binding region, ATPase-like. (490 aa)
RPD_1998ATP-binding region, ATPase-like. (465 aa)
RPD_1944Multi-sensor signal transduction histidine kinase. (607 aa)
RPD_1872Sensor histidine kinase. (936 aa)
RPD_1700Cell cycle control histidine kinase CckA. (850 aa)
RPD_1666PAS/PAC sensor hybrid histidine kinase. (1427 aa)
RPD_1559ATP-binding region, ATPase-like. (469 aa)
RPD_1497Hpt sensor hybrid histidine kinase. (880 aa)
RPD_1447PAS/PAC sensor signal transduction histidine kinase. (1201 aa)
RPD_1343PAS/PAC sensor signal transduction histidine kinase. (510 aa)
RPD_1180PAS/PAC sensor signal transduction histidine kinase. (451 aa)
RPD_0926Histidine kinase. (403 aa)
RPD_0887Histidine kinase. (451 aa)
RPD_0837ATP-binding region, ATPase-like. (1168 aa)
RPD_0743HWE histidine kinase. (483 aa)
RPD_0665Osmosensitive K+ channel His kinase sensor. (907 aa)
RPD_0600ATP-binding region, ATPase-like. (449 aa)
RPD_0407Multi-sensor hybrid histidine kinase. (650 aa)
RPD_0368Signal transduction histidine kinase. (563 aa)
RPD_0327Signal transduction histidine kinase. (400 aa)
RPD_0284PAS/PAC sensor hybrid histidine kinase. (1105 aa)
RPD_0207PAS/PAC sensor signal transduction histidine kinase. (837 aa)
RPD_0130ATP-binding region, ATPase-like. (440 aa)
RPD_0119Sensor histidine kinase with PAS/PAC. (909 aa)
RPD_0118HWE histidine kinase. (538 aa)
gyrBDNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (813 aa)
Your Current Organism:
Rhodopseudomonas palustris BisB5
NCBI taxonomy Id: 316057
Other names: R. palustris BisB5, Rhodopseudomonas palustris str. BisB5, Rhodopseudomonas palustris strain BisB5
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