STRINGSTRING
RPB_0516 RPB_0516 RPB_1088 RPB_1088 RPB_2688 RPB_2688 RPB_2821 RPB_2821 RPB_2823 RPB_2823 RPB_2824 RPB_2824 RPB_4004 RPB_4004
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPB_0516Farnesyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. (308 aa)
RPB_1088Farnesyltranstransferase; Belongs to the FPP/GGPP synthase family. (336 aa)
RPB_2688Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. (239 aa)
RPB_2821RseP peptidase. Metallo peptidase. MEROPS family M50B. (383 aa)
RPB_2823Phosphatidate cytidylyltransferase; Belongs to the CDS family. (282 aa)
RPB_2824Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. (252 aa)
RPB_4004Farnesyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. (287 aa)
Your Current Organism:
Rhodopseudomonas palustris HaA2
NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2
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