STRINGSTRING
RPB_0388 RPB_0388 RPB_0389 RPB_0389 rsmG rsmG RPB_1510 RPB_1510 RPB_4523 RPB_4523 RPB_4524 RPB_4524
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPB_0388Chromosome segregation DNA-binding protein; Belongs to the ParB family. (296 aa)
RPB_0389Chromosome segregation ATPase. (271 aa)
rsmGMethyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. (237 aa)
RPB_1510Cobyrinic acid a,c-diamide synthase. (226 aa)
RPB_4523Hypothetical protein. (412 aa)
RPB_4524Tyrosine recombinase XerD subunit; Belongs to the 'phage' integrase family. (310 aa)
Your Current Organism:
Rhodopseudomonas palustris HaA2
NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2
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