STRINGSTRING
RPB_0095 RPB_0095 RPB_0111 RPB_0111 RPB_0216 RPB_0216 acsA acsA RPB_0509 RPB_0509 RPB_0525 RPB_0525 RPB_0557 RPB_0557 RPB_0558 RPB_0558 RPB_0559 RPB_0559 RPB_0701 RPB_0701 RPB_0819 RPB_0819 RPB_0820 RPB_0820 RPB_0821 RPB_0821 RPB_0984 RPB_0984 RPB_0985 RPB_0985 RPB_0986 RPB_0986 RPB_0987 RPB_0987 RPB_1026 RPB_1026 ackA ackA RPB_1084 RPB_1084 RPB_1108 RPB_1108 RPB_1146 RPB_1146 RPB_1162 RPB_1162 RPB_1184 RPB_1184 RPB_1237 RPB_1237 RPB_1238 RPB_1238 RPB_1239 RPB_1239 RPB_1240 RPB_1240 RPB_1682 RPB_1682 RPB_1684 RPB_1684 RPB_1685 RPB_1685 RPB_1686 RPB_1686 RPB_1687 RPB_1687 RPB_1688 RPB_1688 RPB_1689 RPB_1689 RPB_1691 RPB_1691 RPB_1746 RPB_1746 RPB_1748 RPB_1748 RPB_1749 RPB_1749 RPB_1750 RPB_1750 RPB_1973 RPB_1973 RPB_2101 RPB_2101 RPB_2105 RPB_2105 RPB_2106 RPB_2106 RPB_2107 RPB_2107 RPB_2115 RPB_2115 RPB_2116 RPB_2116 RPB_2117 RPB_2117 RPB_2118 RPB_2118 vapC-2 vapC-2 RPB_2120 RPB_2120 RPB_2121 RPB_2121 RPB_2122 RPB_2122 RPB_2123 RPB_2123 RPB_2124 RPB_2124 RPB_2259 RPB_2259 RPB_2260 RPB_2260 RPB_2261 RPB_2261 RPB_2342 RPB_2342 RPB_2350 RPB_2350 RPB_2351 RPB_2351 RPB_2352 RPB_2352 RPB_2367 RPB_2367 RPB_2425 RPB_2425 ddpX ddpX RPB_2427 RPB_2427 RPB_2702 RPB_2702 RPB_2703 RPB_2703 RPB_2932 RPB_2932 RPB_2933 RPB_2933 RPB_2934 RPB_2934 RPB_3204 RPB_3204 RPB_3205 RPB_3205 RPB_3206 RPB_3206 RPB_3207 RPB_3207 RPB_3208 RPB_3208 RPB_3249 RPB_3249 RPB_3258 RPB_3258 RPB_3259 RPB_3259 RPB_3260 RPB_3260 RPB_3261 RPB_3261 RPB_3263 RPB_3263 RPB_3264 RPB_3264 RPB_3265 RPB_3265 RPB_3266 RPB_3266 RPB_3267 RPB_3267 RPB_3394 RPB_3394 RPB_3557 RPB_3557 RPB_3587 RPB_3587 RPB_3588 RPB_3588 RPB_3589 RPB_3589 RPB_3601 RPB_3601 RPB_3602 RPB_3602 RPB_3605 RPB_3605 RPB_3607 RPB_3607 RPB_3634 RPB_3634 RPB_3635 RPB_3635 RPB_3636 RPB_3636 RPB_3637 RPB_3637 RPB_3638 RPB_3638 RPB_3639 RPB_3639 RPB_3640 RPB_3640 RPB_3641 RPB_3641 RPB_3642 RPB_3642 RPB_3933 RPB_3933 RPB_4073 RPB_4073 RPB_4074 RPB_4074 RPB_4075 RPB_4075 RPB_4076 RPB_4076 RPB_4077 RPB_4077 RPB_4078 RPB_4078 RPB_4079 RPB_4079 RPB_4080 RPB_4080 RPB_4102 RPB_4102 RPB_4151 RPB_4151 RPB_4155 RPB_4155 RPB_4156 RPB_4156 RPB_4157 RPB_4157 RPB_4158 RPB_4158 RPB_4326 RPB_4326 RPB_4454 RPB_4454 RPB_4455 RPB_4455 RPB_4604 RPB_4604 RPB_4605 RPB_4605 RPB_4606 RPB_4606 RPB_4639 RPB_4639 RPB_4640 RPB_4640 RPB_4641 RPB_4641 RPB_4674 RPB_4674 RPB_4675 RPB_4675
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPB_0095Alcohol dehydrogenase superfamily, zinc-containing. (324 aa)
RPB_0111Enoyl-CoA hydratase. (275 aa)
RPB_0216Acyl-CoA dehydrogenase-like. (388 aa)
acsAAcetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (652 aa)
RPB_0509acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
RPB_0525Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
RPB_0557Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (267 aa)
RPB_0558Acyl-CoA dehydrogenase-like. (386 aa)
RPB_0559Acyl-CoA dehydrogenase-like. (355 aa)
RPB_0701Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (261 aa)
RPB_0819Electron transfer flavoprotein beta-subunit. (249 aa)
RPB_0820Electron transfer flavoprotein, alpha subunit. (316 aa)
RPB_08213-hydroxyacyl-CoA dehydrogenase. (293 aa)
RPB_0984Electron transfer flavoprotein beta-subunit. (298 aa)
RPB_0985Electron transfer flavoprotein alpha chain, FixB. (367 aa)
RPB_0986Electron-transferring-flavoprotein dehydrogenase; Part of an electron transfer system. Belongs to the ETF-QO/FixC family. (435 aa)
RPB_0987Ferredoxin like protein, fixX; Could be a 3Fe-4S cluster-containing protein. (98 aa)
RPB_1026Phosphate butyryltransferase. (472 aa)
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (400 aa)
RPB_1084Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. (552 aa)
RPB_1108Alcohol dehydrogenase superfamily, zinc-containing. (328 aa)
RPB_1146Acyl-CoA dehydrogenase-like. (431 aa)
RPB_1162Acyl-CoA dehydrogenase-like. (404 aa)
RPB_1184Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (448 aa)
RPB_1237phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (444 aa)
RPB_1238Acyl-CoA dehydrogenase-like. (398 aa)
RPB_1239Acyl-CoA dehydrogenase-like. (378 aa)
RPB_1240Enoyl-CoA hydratase. (282 aa)
RPB_1682Acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
RPB_1684Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (252 aa)
RPB_1685Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (268 aa)
RPB_1686AMP-dependent synthetase and ligase. (624 aa)
RPB_1687Acyl-CoA dehydrogenase-like. (375 aa)
RPB_1688Acyl-CoA dehydrogenase-like. (415 aa)
RPB_1689Acyl-CoA dehydrogenase-like. (415 aa)
RPB_1691Enoyl-CoA hydratase. (260 aa)
RPB_1746Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. (699 aa)
RPB_1748Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (395 aa)
RPB_1749Acyl-CoA dehydrogenase-like. (396 aa)
RPB_1750Acyl-CoA dehydrogenase-like. (380 aa)
RPB_1973Epoxide hydrolase. (212 aa)
RPB_2101Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (389 aa)
RPB_2105Thiolase. (404 aa)
RPB_2106Protein of unknown function DUF35. (122 aa)
RPB_2107CoA-binding. (702 aa)
RPB_2115Short chain enoyl-CoA hydratase. (281 aa)
RPB_2116Transcriptional regulator, TetR family. (218 aa)
RPB_2117Methylmalonate-semialdehyde dehydrogenase (acylating). (498 aa)
RPB_2118Hypothetical protein. (93 aa)
vapC-2PilT protein-like; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (142 aa)
RPB_2120Acyl-CoA dehydrogenase-like. (382 aa)
RPB_2121Enoyl-CoA hydratase/isomerase. (357 aa)
RPB_21223-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. (295 aa)
RPB_2123AMP-dependent synthetase and ligase. (572 aa)
RPB_2124Enoyl-CoA hydratase. (309 aa)
RPB_2259Transcriptional regulator, TetR family. (221 aa)
RPB_2260Acyl-CoA dehydrogenase-like. (410 aa)
RPB_2261Aminoglycoside phosphotransferase. (352 aa)
RPB_2342Carboxyl transferase. (510 aa)
RPB_2350Thiolase. (382 aa)
RPB_2351Protein of unknown function DUF35. (130 aa)
RPB_2352MaoC-like dehydratase. (286 aa)
RPB_2367Carbamoyl-phosphate synthase L chain, ATP-binding. (671 aa)
RPB_2425Phenylpyruvate decarboxylase. (543 aa)
ddpXPeptidase M15D, vanX D-ala-D-ala dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. (250 aa)
RPB_2427Acyl-CoA dehydrogenase-like. (549 aa)
RPB_2702Conserved hypothetical protein. (125 aa)
RPB_2703Enoyl-CoA hydratase/isomerase. (268 aa)
RPB_2932hydroxymethylglutaryl-CoA lyase. (301 aa)
RPB_2933Carbamoyl-phosphate synthase L chain, ATP-binding. (671 aa)
RPB_2934Propionyl-CoA carboxylase. (534 aa)
RPB_3204HI0933-like protein. (410 aa)
RPB_3205Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (305 aa)
RPB_3206MaoC-like dehydratase. (166 aa)
RPB_3207Alcohol dehydrogenase superfamily, zinc-containing. (324 aa)
RPB_3208DSBA oxidoreductase. (206 aa)
RPB_3249Aldehyde dehydrogenase. (476 aa)
RPB_3258Enoyl-CoA hydratase/isomerase. (259 aa)
RPB_3259Carbamoyl-phosphate synthase L chain, ATP-binding. (659 aa)
RPB_3260Propionyl-CoA carboxylase. (540 aa)
RPB_3261AMP-dependent synthetase and ligase. (534 aa)
RPB_3263Transcriptional regulator, AraC family. (274 aa)
RPB_3264Glutathione S-transferase-like. (216 aa)
RPB_3265Twin-arginine translocation pathway signal. (407 aa)
RPB_3266Acyl-CoA dehydrogenase-like. (385 aa)
RPB_3267Acyl-CoA dehydrogenase-like. (379 aa)
RPB_33943-hydroxyisobutyrate dehydrogenase. (289 aa)
RPB_3557Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (259 aa)
RPB_3587Protein of unknown function DUF35. (137 aa)
RPB_3588Thiolase. (379 aa)
RPB_3589Short-chain dehydrogenase/reductase SDR. (304 aa)
RPB_3601Acyl-CoA dehydrogenase-like. (424 aa)
RPB_3602Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (259 aa)
RPB_3605Enoyl-CoA hydratase. (266 aa)
RPB_3607acetyl-CoA acetyltransferase. (503 aa)
RPB_3634phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (444 aa)
RPB_3635Phenylacetic acid degradation protein PaaD. (157 aa)
RPB_3636Phenylacetic acid degradation protein paaN. (678 aa)
RPB_3637Phenylacetate-CoA oxygenase/reductase, PaaK subunit. (365 aa)
RPB_3638Phenylacetate-CoA oxygenase, PaaJ subunit. (167 aa)
RPB_3639Phenylacetate-CoA oxygenase, PaaI subunit. (258 aa)
RPB_3640Phenylacetic acid degradation B. (95 aa)
RPB_3641Phenylacetate-CoA oxygenase, PaaG subunit. (355 aa)
RPB_3642Transcriptional regulator, TetR family. (227 aa)
RPB_3933isovaleryl-CoA dehydrogenase. (390 aa)
RPB_4073Enoyl-CoA hydratase. (258 aa)
RPB_4074Acyl-CoA dehydrogenase-like. (381 aa)
RPB_40753-oxoacyl-acyl carrier protein reductase. (275 aa)
RPB_4076MaoC-like dehydratase. (137 aa)
RPB_4077Conserved hypothetical protein. (148 aa)
RPB_4078Thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
RPB_4079Transcriptional regulator, TetR family. (244 aa)
RPB_4080AMP-dependent synthetase and ligase. (518 aa)
RPB_4102Acyl-CoA dehydrogenase-like. (415 aa)
RPB_4151Acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (417 aa)
RPB_4155Conserved hypothetical protein. (49 aa)
RPB_4156MaoC-like dehydratase. (160 aa)
RPB_4157MaoC-like dehydratase. (156 aa)
RPB_4158Conserved hypothetical protein. (97 aa)
RPB_4326AMP-dependent synthetase and ligase. (636 aa)
RPB_4454Acyl-CoA dehydrogenase-like. (593 aa)
RPB_4455Enoyl-CoA hydratase. (253 aa)
RPB_46043-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (738 aa)
RPB_4605Acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
RPB_4606Acyl-CoA dehydrogenase-like. (596 aa)
RPB_4639Conserved hypothetical protein. (145 aa)
RPB_4640Putative cytochrome c552 precursor. (115 aa)
RPB_4641Acyl-CoA dehydrogenase-like. (421 aa)
RPB_4674Acyl-CoA dehydrogenase-like. (379 aa)
RPB_4675Acyl-CoA dehydrogenase-like. (397 aa)
Your Current Organism:
Rhodopseudomonas palustris HaA2
NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2
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