STRINGSTRING
RPB_0019 RPB_0019 RPB_0020 RPB_0020 RPB_0490 RPB_0490 RPB_0500 RPB_0500 RPB_1903 RPB_1903 RPB_3211 RPB_3211 RPB_3584 RPB_3584 RPB_3603 RPB_3603 RPB_3604 RPB_3604 RPB_3606 RPB_3606 RPB_3653 RPB_3653 RPB_3715 RPB_3715
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPB_0019Short-chain dehydrogenase/reductase SDR. (245 aa)
RPB_0020DSBA oxidoreductase. (200 aa)
RPB_0490Conserved hypothetical protein. (357 aa)
RPB_0500Hypothetical protein. (293 aa)
RPB_1903Gluconolactonase. (309 aa)
RPB_3211Quinoprotein glucose dehydrogenase. (837 aa)
RPB_3584Phenylacetic acid degradation-related protein. (145 aa)
RPB_3603Conserved hypothetical protein. (135 aa)
RPB_3604Aminoglycoside phosphotransferase. (331 aa)
RPB_3606Oxoacyl carrier protein reductase. (259 aa)
RPB_3653Glyoxalase/bleomycin resistance protein/dioxygenase. (302 aa)
RPB_3715Thioesterase superfamily. (173 aa)
Your Current Organism:
Rhodopseudomonas palustris HaA2
NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2
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