STRINGSTRING
RPB_0059 RPB_0059 RPB_0060 RPB_0060 RPB_0146 RPB_0146 RPB_0148 RPB_0148 RPB_0149 RPB_0149 RPB_0150 RPB_0150 RPB_0151 RPB_0151 RPB_0152 RPB_0152 RPB_0153 RPB_0153 RPB_0155 RPB_0155 RPB_0156 RPB_0156 RPB_0236 RPB_0236 RPB_0237 RPB_0237 RPB_0238 RPB_0238 RPB_0239 RPB_0239 RPB_0240 RPB_0240 RPB_0241 RPB_0241 RPB_0242 RPB_0242 RPB_0243 RPB_0243 RPB_0660 RPB_0660 RPB_0958 RPB_0958 RPB_1200 RPB_1200 RPB_1201 RPB_1201 RPB_1260 RPB_1260 RPB_1261 RPB_1261 RPB_1262 RPB_1262 RPB_1263 RPB_1263 RPB_1264 RPB_1264 RPB_1265 RPB_1265 RPB_1301 RPB_1301 nuoA nuoA nuoB nuoB nuoC nuoC RPB_1350 RPB_1350 RPB_1351 RPB_1351 RPB_1352 RPB_1352 nuoH1 nuoH1 nuoI1 nuoI1 RPB_1355 RPB_1355 nuoK nuoK RPB_1357 RPB_1357 RPB_1358 RPB_1358 nuoN nuoN RPB_1769 RPB_1769 nuoA-2 nuoA-2 nuoB-2 nuoB-2 nuoC-2 nuoC-2 nuoD nuoD RPB_2577 RPB_2577 RPB_2579 RPB_2579 RPB_2580 RPB_2580 nuoH2 nuoH2 nuoI2 nuoI2 RPB_2583 RPB_2583 nuoK-2 nuoK-2 RPB_2585 RPB_2585 RPB_2586 RPB_2586 nuoN-2 nuoN-2 ctaA ctaA RPB_3987 RPB_3987 RPB_4178 RPB_4178 RPB_4179 RPB_4179 RPB_4306 RPB_4306 RPB_4456 RPB_4456 RPB_4577 RPB_4577 RPB_4581 RPB_4581 RPB_4582 RPB_4582 RPB_4583 RPB_4583 ctaG ctaG RPB_4585 RPB_4585 ctaB ctaB RPB_4587 RPB_4587 RPB_4588 RPB_4588
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPB_0059Two component transcriptional regulator, Fis family. (184 aa)
RPB_0060Periplasmic sensor signal transduction histidine kinase. (440 aa)
RPB_0146Conserved hypothetical protein. (249 aa)
RPB_0148NADH dehydrogenase (quinone). (961 aa)
RPB_0149NADH-ubiquinone oxidoreductase, chain 4L. (120 aa)
RPB_0150NADH dehydrogenase (quinone). (511 aa)
RPB_0151Cation antiporter. (162 aa)
RPB_0152Multiple resistance and pH regulation protein F. (89 aa)
RPB_0153Na+/H+ antiporter subunit. (139 aa)
RPB_0155Cytochrome-c oxidase; Belongs to the heme-copper respiratory oxidase family. (841 aa)
RPB_0156Cytochrome c oxidase, subunit II. (232 aa)
RPB_0236Two component transcriptional regulator, Fis family. (177 aa)
RPB_0237Periplasmic sensor signal transduction histidine kinase. (437 aa)
RPB_0238Surfeit protein. (278 aa)
RPB_0239Cytochrome C oxidase subunit IV. (130 aa)
RPB_0240Cytochrome c oxidase, subunit III. (209 aa)
RPB_0241Cytochrome-c oxidase; Belongs to the heme-copper respiratory oxidase family. (669 aa)
RPB_0242Ubiquinol oxidase, subunit II. (385 aa)
RPB_0243MFS permease. (435 aa)
RPB_0660Dehydrogenase. (321 aa)
RPB_09584Fe-4S ferredoxin, iron-sulfur binding. (64 aa)
RPB_1200Cytochrome b6-F complex iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (175 aa)
RPB_1201Cytochrome b/c1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (689 aa)
RPB_1260NADH dehydrogenase (quinone). (672 aa)
RPB_1261Respiratory-chain NADH dehydrogenase, subunit 1. (316 aa)
RPB_1262Conserved hypothetical protein. (220 aa)
RPB_1263NADH dehydrogenase (quinone). (483 aa)
RPB_1264NADH-ubiquinone oxidoreductase, chain 49kDa. (503 aa)
RPB_1265NADH ubiquinone oxidoreductase, 20 kDa subunit. (177 aa)
RPB_1301Putative transcriptional regulator, XRE family. (85 aa)
nuoANADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (129 aa)
nuoBNADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (208 aa)
nuoCNADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family. (581 aa)
RPB_1350NADH dehydrogenase (ubiquinone), 24 kDa subunit. (157 aa)
RPB_1351NADH dehydrogenase (quinone). (428 aa)
RPB_1352NADH-quinone oxidoreductase, chain G; Belongs to the complex I 75 kDa subunit family. (872 aa)
nuoH1Respiratory-chain NADH dehydrogenase, subunit 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. (319 aa)
nuoI1NADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (171 aa)
RPB_1355NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (168 aa)
nuoKNADH-ubiquinone oxidoreductase, chain 4L; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (102 aa)
RPB_1357Proton-translocating NADH-quinone oxidoreductase, chain L. (688 aa)
RPB_1358Proton-translocating NADH-quinone oxidoreductase, chain M. (481 aa)
nuoNNADH dehydrogenase (quinone); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (453 aa)
RPB_1769Cytochrome c, class I. (183 aa)
nuoA-2NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (121 aa)
nuoB-2NADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (204 aa)
nuoC-2NADH (or F420H2) dehydrogenase, subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. (204 aa)
nuoDNADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. (401 aa)
RPB_2577NADH-quinone oxidoreductase, E subunit. (249 aa)
RPB_2579NADH-quinone oxidoreductase, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (441 aa)
RPB_2580NADH-quinone oxidoreductase, chain G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (691 aa)
nuoH2Respiratory-chain NADH dehydrogenase, subunit 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. (341 aa)
nuoI2NADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (162 aa)
RPB_2583NADH dehydrogenase (quinone); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (212 aa)
nuoK-2NADH-ubiquinone oxidoreductase, chain 4L; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (103 aa)
RPB_2585Proton-translocating NADH-quinone oxidoreductase, chain L. (701 aa)
RPB_2586Proton-translocating NADH-quinone oxidoreductase, chain M. (505 aa)
nuoN-2Proton-translocating NADH-quinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (478 aa)
ctaACytochrome oxidase assembly; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. (365 aa)
RPB_3987Cytochrome c, class I. (139 aa)
RPB_4178Peptidase M16-like. (462 aa)
RPB_4179Peptidase M16-like; Belongs to the peptidase M16 family. (476 aa)
RPB_4306Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (177 aa)
RPB_4456Conserved hypothetical protein. (160 aa)
RPB_4577Peptidase M16-like; Belongs to the peptidase M16 family. (429 aa)
RPB_4581Surfeit protein. (259 aa)
RPB_4582Protein of unknown function DUF983. (132 aa)
RPB_4583Cytochrome c oxidase, subunit III. (284 aa)
ctaGCytochrome c oxidase assembly protein CtaG/Cox11; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family. (208 aa)
RPB_4585Putative CoxF. (52 aa)
ctaBProtoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (313 aa)
RPB_4587Cytochrome-c oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (541 aa)
RPB_4588Cytochrome-c oxidase; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (284 aa)
Your Current Organism:
Rhodopseudomonas palustris HaA2
NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2
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