STRINGSTRING
RPB_0830 RPB_0830 RPB_1568 RPB_1568 RPB_1569 RPB_1569 RPB_2830 RPB_2830 RPB_4676 RPB_4676
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPB_08304-carboxymuconolactone decarboxylase. (126 aa)
RPB_1568Carboxymuconolactone decarboxylase. (109 aa)
RPB_1569Transcriptional regulator, MerR family. (144 aa)
RPB_2830Cupin region. (135 aa)
RPB_4676Carboxymuconolactone decarboxylase. (181 aa)
Your Current Organism:
Rhodopseudomonas palustris HaA2
NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2
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