(5 nodes) ABC transporter, ferric cation import, FbpC, and Bacterial extracellular solute-binding protein network (Rhodopseudomonas palustris HaA2)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPB_4211	Extracellular solute-binding protein, family 1. (598 aa)
	RPB_4213	Binding-protein-dependent transport systems inner membrane component. (268 aa)
	RPB_4214	Binding-protein-dependent transport systems inner membrane component. (300 aa)
	RPB_4215	ABC transporter related; Belongs to the ABC transporter superfamily. (367 aa)
	RPB_4216	ABC transporter related; Belongs to the ABC transporter superfamily. (359 aa)

Your Current Organism:

Rhodopseudomonas palustris HaA2

NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
RPB_4211	RPB_4213	Extracellular solute-binding protein, family 1.	Binding-protein-dependent transport systems inner membrane component.	0.993
RPB_4211	RPB_4214	Extracellular solute-binding protein, family 1.	Binding-protein-dependent transport systems inner membrane component.	0.986
RPB_4211	RPB_4215	Extracellular solute-binding protein, family 1.	ABC transporter related; Belongs to the ABC transporter superfamily.	0.986
RPB_4211	RPB_4216	Extracellular solute-binding protein, family 1.	ABC transporter related; Belongs to the ABC transporter superfamily.	0.986
RPB_4213	RPB_4211	Binding-protein-dependent transport systems inner membrane component.	Extracellular solute-binding protein, family 1.	0.993
RPB_4213	RPB_4214	Binding-protein-dependent transport systems inner membrane component.	Binding-protein-dependent transport systems inner membrane component.	0.997
RPB_4213	RPB_4215	Binding-protein-dependent transport systems inner membrane component.	ABC transporter related; Belongs to the ABC transporter superfamily.	0.997
RPB_4213	RPB_4216	Binding-protein-dependent transport systems inner membrane component.	ABC transporter related; Belongs to the ABC transporter superfamily.	0.997
RPB_4214	RPB_4211	Binding-protein-dependent transport systems inner membrane component.	Extracellular solute-binding protein, family 1.	0.986
RPB_4214	RPB_4213	Binding-protein-dependent transport systems inner membrane component.	Binding-protein-dependent transport systems inner membrane component.	0.997
RPB_4214	RPB_4215	Binding-protein-dependent transport systems inner membrane component.	ABC transporter related; Belongs to the ABC transporter superfamily.	0.997
RPB_4214	RPB_4216	Binding-protein-dependent transport systems inner membrane component.	ABC transporter related; Belongs to the ABC transporter superfamily.	0.996
RPB_4215	RPB_4211	ABC transporter related; Belongs to the ABC transporter superfamily.	Extracellular solute-binding protein, family 1.	0.986
RPB_4215	RPB_4213	ABC transporter related; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.997
RPB_4215	RPB_4214	ABC transporter related; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.997
RPB_4215	RPB_4216	ABC transporter related; Belongs to the ABC transporter superfamily.	ABC transporter related; Belongs to the ABC transporter superfamily.	0.971
RPB_4216	RPB_4211	ABC transporter related; Belongs to the ABC transporter superfamily.	Extracellular solute-binding protein, family 1.	0.986
RPB_4216	RPB_4213	ABC transporter related; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.997
RPB_4216	RPB_4214	ABC transporter related; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.996
RPB_4216	RPB_4215	ABC transporter related; Belongs to the ABC transporter superfamily.	ABC transporter related; Belongs to the ABC transporter superfamily.	0.971