(16 nodes) Receptor family ligand binding region, and ABC transporter, permease network (Rhodopseudomonas palustris HaA2)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPB_0692	Extracellular ligand-binding receptor. (379 aa)
	RPB_0693	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (349 aa)
	RPB_0694	Inner-membrane translocator, ABC transporter related; Belongs to the binding-protein-dependent transport system permease family. (583 aa)
	RPB_0695	ABC transporter related. (252 aa)
	RPB_3566	Extracellular ligand-binding receptor. (411 aa)
	RPB_3571	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (346 aa)
	RPB_3572	Branched-chain amino acid transport system ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family. (589 aa)
	RPB_3573	ABC transporter related. (239 aa)
	RPB_3575	Extracellular ligand-binding receptor. (385 aa)
	RPB_3890	ABC transporter related. (255 aa)
	RPB_3891	ABC transporter ATPase component; Belongs to the binding-protein-dependent transport system permease family. (954 aa)
	RPB_3892	Extracellular ligand-binding receptor. (381 aa)
	RPB_4630	Extracellular ligand-binding receptor. (383 aa)
	RPB_4631	ABC transporter related. (241 aa)
	RPB_4632	ABC transporter ATPase component; Belongs to the binding-protein-dependent transport system permease family. (590 aa)
	RPB_4633	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (345 aa)

Your Current Organism:

Rhodopseudomonas palustris HaA2

NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
RPB_0692	RPB_0693	Extracellular ligand-binding receptor.	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	0.931
RPB_0692	RPB_0694	Extracellular ligand-binding receptor.	Inner-membrane translocator, ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.	0.958
RPB_0692	RPB_0695	Extracellular ligand-binding receptor.	ABC transporter related.	0.761
RPB_0692	RPB_3571	Extracellular ligand-binding receptor.	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	0.871
RPB_0692	RPB_3572	Extracellular ligand-binding receptor.	Branched-chain amino acid transport system ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.	0.904
RPB_0692	RPB_3573	Extracellular ligand-binding receptor.	ABC transporter related.	0.500
RPB_0692	RPB_3890	Extracellular ligand-binding receptor.	ABC transporter related.	0.493
RPB_0692	RPB_3891	Extracellular ligand-binding receptor.	ABC transporter ATPase component; Belongs to the binding-protein-dependent transport system permease family.	0.904
RPB_0692	RPB_4631	Extracellular ligand-binding receptor.	ABC transporter related.	0.465
RPB_0692	RPB_4632	Extracellular ligand-binding receptor.	ABC transporter ATPase component; Belongs to the binding-protein-dependent transport system permease family.	0.891
RPB_0692	RPB_4633	Extracellular ligand-binding receptor.	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	0.840
RPB_0693	RPB_0692	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	Extracellular ligand-binding receptor.	0.931
RPB_0693	RPB_0694	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	Inner-membrane translocator, ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.	0.980
RPB_0693	RPB_0695	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter related.	0.951
RPB_0693	RPB_3572	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	Branched-chain amino acid transport system ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.	0.917
RPB_0693	RPB_3573	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter related.	0.769
RPB_0693	RPB_3575	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	Extracellular ligand-binding receptor.	0.840
RPB_0693	RPB_3890	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter related.	0.796
RPB_0693	RPB_3891	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter ATPase component; Belongs to the binding-protein-dependent transport system permease family.	0.678
RPB_0693	RPB_3892	Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.	Extracellular ligand-binding receptor.	0.836