STRINGSTRING
RPB_2267 RPB_2267 RPB_2832 RPB_2832 RPB_2833 RPB_2833 pxpA pxpA RPB_3621 RPB_3621 RPB_4432 RPB_4432
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPB_2267Transcriptional regulator, IclR family. (288 aa)
RPB_2832Conserved hypothetical protein. (242 aa)
RPB_2833Allophanate hydrolase subunit 2. (335 aa)
pxpALamB/YcsF; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (254 aa)
RPB_3621Protein of unknown function DUF1445; Belongs to the D-glutamate cyclase family. (272 aa)
RPB_4432Transcriptional regulator, IclR family. (271 aa)
Your Current Organism:
Rhodopseudomonas palustris HaA2
NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2
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