13 items (Rhodopseudomonas palustris HaA2) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPB_3091	Conserved hypothetical protein. (362 aa)
	RPB_3092	ABC transporter related. (275 aa)
	RPB_3093	Binding-protein-dependent transport systems inner membrane component. (259 aa)
	RPB_3098	Putative exported protein. (364 aa)
	RPB_3099	Binding-protein-dependent transport systems inner membrane component. (261 aa)
	RPB_3100	ABC transporter related. (276 aa)
	RPB_3110	Twin-arginine translocation pathway signal. (346 aa)
	RPB_3118	Binding-protein-dependent transport systems inner membrane component. (284 aa)
	RPB_3119	ABC transporter related. (267 aa)
	RPB_3120	Twin-arginine translocation pathway signal. (340 aa)
	RPB_3333	Extracellular solute-binding protein, family 3. (341 aa)
	RPB_3334	Binding-protein-dependent transport systems inner membrane component. (265 aa)
	RPB_3335	ABC transporter related. (268 aa)

Your Current Organism:

Rhodopseudomonas palustris HaA2

NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
RPB_3091	RPB_3092	Conserved hypothetical protein.	ABC transporter related.	0.873
RPB_3091	RPB_3093	Conserved hypothetical protein.	Binding-protein-dependent transport systems inner membrane component.	0.943
RPB_3091	RPB_3098	Conserved hypothetical protein.	Putative exported protein.	0.741
RPB_3091	RPB_3099	Conserved hypothetical protein.	Binding-protein-dependent transport systems inner membrane component.	0.734
RPB_3091	RPB_3100	Conserved hypothetical protein.	ABC transporter related.	0.440
RPB_3091	RPB_3118	Conserved hypothetical protein.	Binding-protein-dependent transport systems inner membrane component.	0.760
RPB_3091	RPB_3119	Conserved hypothetical protein.	ABC transporter related.	0.463
RPB_3091	RPB_3333	Conserved hypothetical protein.	Extracellular solute-binding protein, family 3.	0.440
RPB_3091	RPB_3334	Conserved hypothetical protein.	Binding-protein-dependent transport systems inner membrane component.	0.697
RPB_3091	RPB_3335	Conserved hypothetical protein.	ABC transporter related.	0.444
RPB_3092	RPB_3091	ABC transporter related.	Conserved hypothetical protein.	0.873
RPB_3092	RPB_3093	ABC transporter related.	Binding-protein-dependent transport systems inner membrane component.	0.952
RPB_3092	RPB_3098	ABC transporter related.	Putative exported protein.	0.534
RPB_3092	RPB_3099	ABC transporter related.	Binding-protein-dependent transport systems inner membrane component.	0.779
RPB_3092	RPB_3110	ABC transporter related.	Twin-arginine translocation pathway signal.	0.492
RPB_3092	RPB_3118	ABC transporter related.	Binding-protein-dependent transport systems inner membrane component.	0.760
RPB_3092	RPB_3120	ABC transporter related.	Twin-arginine translocation pathway signal.	0.465
RPB_3092	RPB_3333	ABC transporter related.	Extracellular solute-binding protein, family 3.	0.454
RPB_3092	RPB_3334	ABC transporter related.	Binding-protein-dependent transport systems inner membrane component.	0.743
RPB_3093	RPB_3091	Binding-protein-dependent transport systems inner membrane component.	Conserved hypothetical protein.	0.943