(49 nodes) Mixed, incl. Toxin-antitoxin complex, and PIN-like domain superfamily network (Rhodopseudomonas palustris HaA2)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPB_0354	Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (81 aa)
	vapC	PilT protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (133 aa)
	RPB_0356	Twin-arginine translocation pathway signal. (353 aa)
	RPB_0575	Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (80 aa)
	RPB_0576	PilT protein-like. (121 aa)
	RPB_0687	HipA-like protein. (413 aa)
	RPB_0688	Transcriptional regulator, XRE family. (110 aa)
	RPB_0689	Radical SAM. (671 aa)
	RPB_1419	TPR repeat protein. (221 aa)
	RPB_1420	Alpha/beta hydrolase. (320 aa)
	RPB_1421	OsmC-like protein. (142 aa)
	RPB_1422	Protein of unknown function UPF0150. (152 aa)
	RPB_1592	Conserved hypothetical protein. (93 aa)
	RPB_1593	Conserved hypothetical protein. (81 aa)
	RPB_1920	PilT protein. (133 aa)
	RPB_1921	Transcriptional regulator, AbrB family. (84 aa)
	tam	Trans-aconitate 2-methyltransferase; Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate. (256 aa)
	RPB_1923	Uncharacterized protein UPF0114. (197 aa)
	RPB_1924	Lytic murein transglycosylase. (411 aa)
	RPB_2020	Protein of unknown function UPF0150. (96 aa)
	RPB_2021	YcfA-like. (64 aa)
	RPB_2022	Protein of unknown function UPF0150. (97 aa)
	vapC-3	PilT protein-like; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (140 aa)
	RPB_2333	Plasmid stabilization protein. (84 aa)
	RPB_2524	Conserved hypothetical protein. (84 aa)
	RPB_2525	Conserved hypothetical protein. (66 aa)
	RPB_2526	Conserved hypothetical protein. (159 aa)
	RPB_2527	YcfA-like. (65 aa)
	RPB_2528	Protein of unknown function UPF0150. (98 aa)
	RPB_2633	Conserved hypothetical protein. (84 aa)
	RPB_2716	Conserved hypothetical protein. (415 aa)
	RPB_2717	Phage Gp37Gp68. (261 aa)
	RPB_2718	Conserved hypothetical protein. (122 aa)
	RPB_2719	Protein of unknown function DUF433. (73 aa)
	RPB_3379	SpoVT/AbrB-like. (87 aa)
	vapC-4	PilT protein-like; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (133 aa)
	RPB_3730	SpoVT/AbrB-like. (78 aa)
	RPB_3763	Hypothetical protein. (385 aa)
	RPB_3764	Conserved hypothetical protein. (79 aa)
	RPB_3765	Protein of unknown function DUF497. (93 aa)
	RPB_3766	Conserved hypothetical protein. (162 aa)
	RPB_3827	Conserved hypothetical protein. (131 aa)
	RPB_3926	Putative transcriptional regulator. (105 aa)
	RPB_4319	YcfA-like. (64 aa)
	RPB_4320	Protein of unknown function UPF0150. (68 aa)
	vapC-5	PilT protein-like; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (134 aa)
	RPB_4438	SpoVT/AbrB-like. (106 aa)
	RPB_4579	YcfA-like. (78 aa)
	RPB_4580	Protein of unknown function UPF0150. (76 aa)

Your Current Organism:

Rhodopseudomonas palustris HaA2

NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RPB_0354	RPB_0356	RPB_0354	RPB_0356	Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	Twin-arginine translocation pathway signal.	0.777
RPB_0354	vapC	RPB_0354	RPB_0355	Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	PilT protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.	0.814
RPB_0356	RPB_0354	RPB_0356	RPB_0354	Twin-arginine translocation pathway signal.	Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	0.777
RPB_0356	vapC	RPB_0356	RPB_0355	Twin-arginine translocation pathway signal.	PilT protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.	0.773
RPB_0575	RPB_0576	RPB_0575	RPB_0576	Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	PilT protein-like.	0.947
RPB_0575	RPB_1592	RPB_0575	RPB_1592	Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	Conserved hypothetical protein.	0.669
RPB_0575	vapC-3	RPB_0575	RPB_2332	Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	PilT protein-like; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.	0.677
RPB_0576	RPB_0575	RPB_0576	RPB_0575	PilT protein-like.	Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.	0.947
RPB_0576	RPB_1592	RPB_0576	RPB_1592	PilT protein-like.	Conserved hypothetical protein.	0.684
RPB_0576	RPB_1593	RPB_0576	RPB_1593	PilT protein-like.	Conserved hypothetical protein.	0.525
RPB_0576	RPB_2333	RPB_0576	RPB_2333	PilT protein-like.	Plasmid stabilization protein.	0.856
RPB_0576	RPB_2633	RPB_0576	RPB_2633	PilT protein-like.	Conserved hypothetical protein.	0.594
RPB_0576	RPB_3379	RPB_0576	RPB_3379	PilT protein-like.	SpoVT/AbrB-like.	0.656
RPB_0576	RPB_3730	RPB_0576	RPB_3730	PilT protein-like.	SpoVT/AbrB-like.	0.591
RPB_0576	RPB_4438	RPB_0576	RPB_4438	PilT protein-like.	SpoVT/AbrB-like.	0.635
RPB_0576	vapC-3	RPB_0576	RPB_2332	PilT protein-like.	PilT protein-like; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.	0.754
RPB_0576	vapC-4	RPB_0576	RPB_3729	PilT protein-like.	PilT protein-like; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.	0.447
RPB_0576	vapC-5	RPB_0576	RPB_4437	PilT protein-like.	PilT protein-like; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.	0.461
RPB_0687	RPB_0688	RPB_0687	RPB_0688	HipA-like protein.	Transcriptional regulator, XRE family.	0.976
RPB_0687	RPB_0689	RPB_0687	RPB_0689	HipA-like protein.	Radical SAM.	0.532