STRINGSTRING
RPB_0841 RPB_0841 RPB_1586 RPB_1586 RPB_1587 RPB_1587 RPB_1590 RPB_1590 RPB_1591 RPB_1591 RPB_1635 RPB_1635 RPB_1636 RPB_1636 RPB_1947 RPB_1947 RPB_1948 RPB_1948 RPB_1949 RPB_1949 RPB_2154 RPB_2154
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPB_0841Transposase IS116/IS110/IS902. (326 aa)
RPB_1586Conserved hypothetical protein. (380 aa)
RPB_1587Conserved hypothetical protein. (450 aa)
RPB_1590AAA_5 ATPase. (834 aa)
RPB_1591Conserved hypothetical protein. (429 aa)
RPB_1635Hypothetical protein. (88 aa)
RPB_1636Conserved hypothetical protein. (112 aa)
RPB_1947Conserved hypothetical protein. (164 aa)
RPB_1948Conserved hypothetical protein. (154 aa)
RPB_1949Hypothetical protein. (139 aa)
RPB_2154Transposase IS116/IS110/IS902. (326 aa)
Your Current Organism:
Rhodopseudomonas palustris HaA2
NCBI taxonomy Id: 316058
Other names: R. palustris HaA2, Rhodopseudomonas palustris str. HaA2, Rhodopseudomonas palustris strain HaA2
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